Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0270 ATGGCAGATGAAGCACACAATGATCTGAAGGAGGAGGTTCCAGAAGTTGTGCCATTTGATCCTACTAAGAAGAAGAAGAAAAAGAAAATTACAATTTTGGATCCTGCTGACGATTCAGTGGATAAATTGGCCGAAAAGACAGAAAATCTGTCAGTTACTGAAGGTGCTGAGAGTACATTTATTGGTTTAAAAAAGAAGAAAAAGAAGCAGGTTGAAATCAGTAACTTGAATGATGAGAGTGGAGATGCAACTGAAGATTTGGATGCCTTGGATCCTGCTGAAGAAGAGGAAGGAGACACTGCTCCTTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAATATGAGGAGCTTCTGGGCAGGGTCTTTAACATTCTACGTGAGAATAATCCTGAACTTGCTGGAGACCGGCGGAGGACTGTTATGAGGCCTCCACAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGATCATGTCATGGCTTTCCTGCTTGCTGAGCTGGGTACGAGTGGCTCTCTAGATGGACAGCAGAGATTGGTCGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATACATCAATGAATATGTCATTTGCCTCGGATGCAAAAGTCCTGACACAATACTTAGTAAGGAAAACCGTCTGTTCTTTCTTCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTCGTTGCTCGCGTTGGCCGTAGGAACGCGGGGACATAA 813 0.4416 MADEAHNDLKEEVPEVVPFDPTKKKKKKKITILDPADDSVDKLAEKTENLSVTEGAESTFIGLKKKKKKQVEISNLNDESGDATEDLDALDPAEEEEGDTAPLQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0270 270 Pfam Domain found in IF2B/IF5 139 248 IPR002735 GO:0003743|GO:0006413
Lan4g0270 270 SMART eIF2Bneu4 140 249 IPR002735 GO:0003743|GO:0006413
Lan4g0270 270 Gene3D - 113 255 - -
Lan4g0270 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 270 - -
Lan4g0270 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 254 IPR016190 GO:0003743|GO:0006413
Lan4g0270 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 222 IPR016189 GO:0003743|GO:0006413
Lan4g0270 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 270 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0270 Lan-Chr4 4392109 4395831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0270 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 76.030 7.14e-137 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0270 K03238 - gmx:100783618 464.536