Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0268 ATGAATGCTTTAATAACCACTTCTTCATCAGTGCTATGTAGTTTCAGCTCTGAAACTATGAGTTCATTTCAGGAAAATATGAAGGCTGACAAAGTTTGCTCTGAATTTAAGTCTCAAAATCCTATACCTCACAGAAAACAAGTCTCTATGAAGTTCTATTCTACTTCAGTGGCCACTTTCCTTTTTGTCATAGTTATCCTTTTTCCTCTGGCTATTGCTGATCTAAATTCAGATAAGCAAGCCCTTCTTGATTTTGCTACTGCTATCCCCCACCGCCGAAACCTCATGTGGAACCCAACCACATCTATCTGTACATCTTGGGTAGGCATCACTTGCAATCAAAATAGAACTCGTGTTATTAGTGTCCGGCTCCCCGGAGTTGGACTCTGGGGCTCCATCCCAGCCAATACACTTGGCAAGCTTGATGCCGTGAAGATTATTAGCCTTCGCTCCAACCGTCTTGGTGGAAATGTGCCTGCTGATGTTGCTTCTCTTCCTTCTCTCCAGTATCTCTACCTTCAGAATAATAACCTTTCTGGTGATATACCTTCCTCATTGTCACCCAAACTCAATACACTTGATTTGTCATATAATTCCTTCACTGGTGCCATTCCCAAGATTTTTGCAAATTTTACAGAACTAACTACTTTGAATCTCCAAAACAACTCGCTATTTGGAGAGATACCTAATCTCAATGTTACTAATCTCAGGCTTTTGAATTTAAGCTACAACCATTTGAATGGCTCTATCCCTGCAGCTCTTCTTATTTTTCCTAATTCATCCTTTGAAGGAAACTCTCTTTTATGCGGGCCACCTTTAAAGCCATGCTCCATAGTTTCCCCTGCACCTAGTCCTGCTTTCACTTCAGCTCCATCTGCAGCTCCTGGAAGAAAAGGCTCGAAAAACAAACTGAGTAAGGTAGCTATCATTGTAATTGCTGTTGGTGGAGCTGTTGTGCTATTTTTCGTAGCTCTTGTTATTGTTCTTTGCTATGTAAAGAAGAAAGATGGTCAAGGCTCCCGCGAAATTAAAGAGAAGGGTCCTAGTGGTGGTAGAGGTGAGAAGCCAAAAGAAGAGTTTGGGAGTGGGGTCCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTCGAGGGTAGTTCTTATAATTTTGATCTTGAAGATTTGCTAAGAGCTTCAGCCGAAGTTTTGGGAAAGGGTAGCTATGGTACTGCATATAAGGCTATATTGGAGGAGTCAGTGACAGTTGTGGTGAAAAGGTTGAAAGAAGTTGTGGTAGGCAAGAGGGACTTTGAACAGCAGATGGAGATTATCGGGAGGGTTGGACAACACCTAAATATCGTGCCACTCCGTGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTGTGTCCAAGGTGGCAACCTATCCACACTCTTGCATGGAAATAGATCCGGTGGAGGAACTCCATTAGATTGGGATTCACGAGTAAAAATATCTCTAGGAACTGCTAGAGGAATTGCCCACATACATTCTGTTTGTGGTCCAAAATTCACACATGGAAACATTAAGTCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTAACCCCACTTATGAATGTTCCTGCAACCCCTTCTAGAGCCGCAGGTTATCGTGCTCCTGAGGTGATTGAAACGCGTAAGCACACTCACAAATCAGATGTGTACAGCTTTGGTGTACTCCTTCTGGAGATGCTAACTGGAAAAGCACCTATCCAATCTCCCGGGCGCGACGACATGGTTGATCTCCCTAGGTGGGTGCAGTCCGTTGTTCGGGAGGAATGGACTGCTGAGGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATAGGCATGGCTTGTGTAGCAAAGATGCCAGATATGAGACCTAGCATGGATGAAGTAGTGAAAATGATTGAGGAAATCCGGCAATCTGACTCAGAAAACCGACCGTCTTCAGAAGAGAATAAATCCAAGGACTCAAATGTTCAGACTCCATAA 2055 0.4263 MNALITTSSSVLCSFSSETMSSFQENMKADKVCSEFKSQNPIPHRKQVSMKFYSTSVATFLFVIVILFPLAIADLNSDKQALLDFATAIPHRRNLMWNPTTSICTSWVGITCNQNRTRVISVRLPGVGLWGSIPANTLGKLDAVKIISLRSNRLGGNVPADVASLPSLQYLYLQNNNLSGDIPSSLSPKLNTLDLSYNSFTGAIPKIFANFTELTTLNLQNNSLFGEIPNLNVTNLRLLNLSYNHLNGSIPAALLIFPNSSFEGNSLLCGPPLKPCSIVSPAPSPAFTSAPSAAPGRKGSKNKLSKVAIIVIAVGGAVVLFFVALVIVLCYVKKKDGQGSREIKEKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESVTVVVKRLKEVVVGKRDFEQQMEIIGRVGQHLNIVPLRAYYYSKDEKLLVYDCVQGGNLSTLLHGNRSGGGTPLDWDSRVKISLGTARGIAHIHSVCGPKFTHGNIKSSNVLLNQDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPIQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKMPDMRPSMDEVVKMIEEIRQSDSENRPSSEENKSKDSNVQTP* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0268 684 ProSiteProfiles Leucine-rich repeat profile. 167 189 IPR001611 GO:0005515
Lan4g0268 684 CDD STKc_IRAK 395 660 - -
Lan4g0268 684 Pfam Leucine Rich Repeat 167 187 IPR001611 GO:0005515
Lan4g0268 684 MobiDBLite consensus disorder prediction 658 675 - -
Lan4g0268 684 Pfam Leucine rich repeat N-terminal domain 76 113 IPR013210 -
Lan4g0268 684 ProSitePatterns Protein kinases ATP-binding region signature. 395 426 IPR017441 GO:0005524
Lan4g0268 684 SUPERFAMILY L domain-like 77 276 - -
Lan4g0268 684 SUPERFAMILY Protein kinase-like (PK-like) 393 658 IPR011009 -
Lan4g0268 684 MobiDBLite consensus disorder prediction 658 684 - -
Lan4g0268 684 PANTHER LRR RECEPTOR-LIKE KINASE 38 684 - -
Lan4g0268 684 Gene3D Phosphorylase Kinase; domain 1 357 463 - -
Lan4g0268 684 PANTHER OS05G0588300 PROTEIN 38 684 - -
Lan4g0268 684 Gene3D Ribonuclease Inhibitor 75 231 IPR032675 -
Lan4g0268 684 Gene3D Ribonuclease Inhibitor 232 277 IPR032675 -
Lan4g0268 684 Pfam Protein kinase domain 392 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0268 684 MobiDBLite consensus disorder prediction 340 364 - -
Lan4g0268 684 ProSiteProfiles Protein kinase domain profile. 389 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0268 684 Gene3D Transferase(Phosphotransferase) domain 1 465 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0268 Lan-Chr4 4384628 4388835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0268 49 682 Receptor kinase-like Gene Family AT5G58300 67.293 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan4g0268 Pkinase 5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0268 - - gmx:100796171 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0268 4 4384628 4388835 Lan2g1054 2 21814814 21819469 LSH
Lan4g0268 4 4384628 4388835 Lan16g0559 16 6584678 6588745 LSH
Lan4g0268 4 4384628 4388835 Lan2g1054 2 21814814 21819469 PCT
Lan2g1054 2 21814814 21819469 Lan4g0268 4 4384628 4388835 PCT