Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0247 ATGGCGGCAGTTGAAGATTCCGTTCCTTCCACTGAGATCGTTGGATCAGTCTCCGATGTCAATCTCTTCAATCGTTGGTCTTACGCTGAAATCAATGTTGCTGACGGGTCTTTGGTAGATTACATTGGTGTGTCTGCTACCAAGCATGCAATCTATGTCCCCCACACTGCTGGGAGGTATTCAGCGAAGCGTTTCAGGAAGGCACAGTGTCCAATTATAGAGAGGCTTACCAACTCTCTTATGATGCATGGACGCAACAACGGGAAAAAGCTGTTGGCAGTAAGGATAATAAAGCATGCACTGGAAATTATCCACTTGCTCACTGACCAAAATCCTATCCAAGTTGTTGTTGATGCTGTTGTCAACAGTGGACCAAGGGAAGATGCTACTAGAATTGGATCTGCTGGTGTTGTTAGACGTCAGGCTGTGGATATTTCTCCCCTGCGACGTGTGAATCAGGCTCTCTATCTCCTTACCACAGGTGCACGTGAGGCTGCATTCAGAAACATTAAGACTATTGCAGAATGCTTGGCAGATGAACTTATCAATGCTGCTAAGGGGTCATCAAACAGCTATGCTATTAAGAAGAAGGATGAGATCGAGAGAGTTGCCAAGGCCAACCGTTAA 627 0.4593 MAAVEDSVPSTEIVGSVSDVNLFNRWSYAEINVADGSLVDYIGVSATKHAIYVPHTAGRYSAKRFRKAQCPIIERLTNSLMMHGRNNGKKLLAVRIIKHALEIIHLLTDQNPIQVVVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0247 208 CDD uS7_Eukaryote 22 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lan4g0247 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Lan4g0247 208 PANTHER RIBOSOMAL PROTEIN S7 9 208 IPR000235 GO:0006412
Lan4g0247 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 208 IPR000235 GO:0006412
Lan4g0247 208 Gene3D Ribosomal protein S7 domain 3 208 IPR036823 -
Lan4g0247 208 Pfam Ribosomal protein S7p/S5e 66 208 IPR023798 -
Lan4g0247 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Lan4g0247 208 PANTHER 40S RIBOSOMAL PROTEIN S5 9 208 - -
Lan4g0247 208 TIGRFAM uS7_euk_arch: ribosomal protein uS7 20 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0247 Lan-Chr4 4056399 4058350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0247 18 208 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 85.864 2.01e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0247 K02989 - csv:116401690 347.821