Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0244 ATGCAACTACAATTATTACTCAACTTTCTATCCTTAACCTTCATATTATGGTCATGGTGCACTATTCATGATGCACAAGCAGACCCTCAAATTCTTTTACTCAACAAAGGTTGCAGCCAATACAACGCAACCAACTTGTCAAATTTCAACCAAAATCTAAACGCAAGTTTGTCAGACATCAAATCACAGGTAACCAACCAAAGCAAGCACTTTGCAACAGCACATCAATCCTTAGGAGCAGACCCTGTCTATGCTTTGTTTCAATGTAGGAACTACCTCTCAAACACTGACTGTGCCGCCTGTTTGGCGGTCGCCGCCACCCAAATCCGCAATTGCTCTGCCGGGGCCAATGGTGCCCGTGTCATCTATGATGGTTGCTTCCTTAGGTATGAGAGCAATGGCTTCTTCGACCAAACCACTCTTCCTGGCAACAGTATGATTTGTGGAAACAACACTGCAAATGTTGGAGCAAATGCATTTAGTGAAGCTGCACAACAAGTGCTAAATGATCTACAAAAGGCAACACCAAAAGTTACTGGTTTCTTTGCAGCTACAAAGACACAAGTAGGTGGTGGTGCACTATATGCTATTGCACAATGTGCTGAAACTGTGACAGAAAGTGGTTGTATGGATTGTTTGAATGTTGGATATAACAACATAGAAAGTTGTCTTCCAAATACAGATGGTAGGGCATTTGATGCTGGATGTTTTATGAGGTATTCAGAGACATCCTTCTTTGCTGATAACCAAACCATTGATATCACACCTTTCTTAAAACAAGAAAGTTCAAGAAAGAAGGGTGCCATTATTGGTGGTGTTGTTGGAGGTGTAGGTCTTATTGTGATCCTCCTTGCATTATTTGCATGGCTTAAACTAAACAAGAAACCTAAGAGGGCTCCTAGAGGTGACATATTAGGAGCAACTGAGTTGAAAGGTCCAGTTAACTATAGGTATAAAGATTTGAAGTCTGCAACAAAAAATTTCAGCGATGAAAATAAACTAGGAGAAGGTGGTTTTGGAGATGTATACAAGGGCACTCTGAAAAATGGAAAAGTTGTTGCAGTCAAAAAATTACTTTTAGGCCAATCAAACAAGATAGATGAAAATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATAGGAATCTGGTTAGACTTCTTGGATGTTGCACTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAATAACAGTCTTGACAGATTCTTATTTGGTGAAAAGAAGGGTTCTCTGAACTGGAAACAACGGTACGATATAACTTTAGGCATGGCAAGGGGTTTGGCTTATTTACATGAGGATTTCCATGTTTGTATCATACATAGAGATATAAAGACTAACAATATTCTCTTAGATGATGATCTTCAGCCTAGAATTGCTGATTTTGGTTTGGCTAGGCTTCTACCAGAGGACAAATCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCACTACATGGTCAGCTATCCGAGAAGGCCGATACTTACAGCTACGGCGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAGCAGTGAATTGAGGACTGATGTTGATGGTGATTTCCTCCTTCAAAGGGCATGGAAACTATATGAGAGAGATATGCACTTGGAGTTAGTGGATAAGACATTGGAAAGTGATGACTATGAGCCAGAAGAAGTGAAGAAAATCATAGAGATTGCTCTTTTGTGCACTCAAGCATCAGGTGCAACAAGACCAACAATGTCTGAAGTAGTAGTCTTACTCAAAAGCAAGAATTTACTACAGAATATGAAACCAACTATGCCTGTCTTTGTTGAATCTAACTATAGGTCCCGGGCAGAAACTTCTGCATCAAGTGGTTCATCTACATCCAATGCCACTGTTTCAACTTCTATACTATCTGCTAGATGA 1944 0.3992 MQLQLLLNFLSLTFILWSWCTIHDAQADPQILLLNKGCSQYNATNLSNFNQNLNASLSDIKSQVTNQSKHFATAHQSLGADPVYALFQCRNYLSNTDCAACLAVAATQIRNCSAGANGARVIYDGCFLRYESNGFFDQTTLPGNSMICGNNTANVGANAFSEAAQQVLNDLQKATPKVTGFFAATKTQVGGGALYAIAQCAETVTESGCMDCLNVGYNNIESCLPNTDGRAFDAGCFMRYSETSFFADNQTIDITPFLKQESSRKKGAIIGGVVGGVGLIVILLALFAWLKLNKKPKRAPRGDILGATELKGPVNYRYKDLKSATKNFSDENKLGEGGFGDVYKGTLKNGKVVAVKKLLLGQSNKIDENFESEVKLISNVHHRNLVRLLGCCTKGQERILVYEYMANNSLDRFLFGEKKGSLNWKQRYDITLGMARGLAYLHEDFHVCIIHRDIKTNNILLDDDLQPRIADFGLARLLPEDKSHLSTRFAGTLGYTAPEYALHGQLSEKADTYSYGVVVLEIISGQKSSELRTDVDGDFLLQRAWKLYERDMHLELVDKTLESDDYEPEEVKKIIEIALLCTQASGATRPTMSEVVVLLKSKNLLQNMKPTMPVFVESNYRSRAETSASSGSSTSNATVSTSILSAR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0244 647 Gene3D Phosphorylase Kinase; domain 1 300 404 - -
Lan4g0244 647 ProSiteProfiles Gnk2-homologous domain profile. 142 245 IPR002902 -
Lan4g0244 647 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 21 644 - -
Lan4g0244 647 Pfam Protein tyrosine and serine/threonine kinase 331 597 IPR001245 GO:0004672|GO:0006468
Lan4g0244 647 ProSiteProfiles Protein kinase domain profile. 328 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0244 647 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Lan4g0244 647 SMART serkin_6 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0244 647 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 644 - -
Lan4g0244 647 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
Lan4g0244 647 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Lan4g0244 647 CDD STKc_IRAK 334 600 - -
Lan4g0244 647 Gene3D - 31 135 IPR038408 -
Lan4g0244 647 Gene3D - 144 245 IPR038408 -
Lan4g0244 647 MobiDBLite consensus disorder prediction 625 647 - -
Lan4g0244 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Lan4g0244 647 SUPERFAMILY Protein kinase-like (PK-like) 313 618 IPR011009 -
Lan4g0244 647 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Lan4g0244 647 Pfam Salt stress response/antifungal 148 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0244 Lan-Chr4 4025152 4032215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0244 12 647 Receptor kinase-like Gene Family AT1G70520 36.321 1.29e-126 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g0244 PK_Tyr_Ser-Thr 4.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0244 - - gmx:100813585 1019.99