Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0243 ATGATGCTGCAACTAACCTTGATATGGTGCTTGACATGGTTGAGCACTAATCACCATGGTGCAGTTGCAGACCCTCAGACACGTCTACTAAACACTGGTTGCAGTCCATTCAATGTAACAACCAATAATTTGCACACCTTCTTTGGCAGTATCAATGGAACGCTTTCAGAAATAAGAGCACAAGTTAGCAACCAAAGCAAGCATTTCGCCACAGCACAAGAAGCCAAGGGTGAGATTCTTGCATTTTCTATGTTTCAGTGTAGAAATTACCTCTCTAAGAAGAATTGTCTTGGTTGCTTTGACACTGCAACGACCCAAATCCAGAATTGTTCTCATGCTAATGGCGCCAGAATCATATATGATGGGTGCTTCCTCAGGTATGAGAGTGAGAGTTTCTATGATCAAACCACTCAACCTGGTAATGGTGTATCATGTGGTAACAAAACTGCAAAGGAAACTCAATTTGATGCAACAGGAAAACAAGCATTACTGAATCTCCAAATAGCAACACCAAGAATTAAAGGTTTTTATGCAGCAACAAAGACACAAGTGGGTGGAAGTGCAATTTATGCCACTGCACAATGTGTTGAAACTGCTACAGAGAATGATTGTCTAGCATGCATGGTAGTTGGATATAATAATTTACAGACATGTCTTCCTAATACAGATGGTAGGGCTTATGATGCTGGTTGTTTCATGAGATATTCTGAGACAGCATTTTTTGCTGATAACCAAACCATTGATATCACATCATATTTAAAACAAGGAGGAGGTTCTACTAAGAAGTGGGCCATTATAGGTGGTGGTGTTGGTGGTGTAAGTCTTGTTGTGATTCTCCTTACATTATTTGTCTGCCATAGACGATCCAAAAAACCAAAGAGAGCCCCTAGAGGTGACATATTGGGAGCAACAGAGTTGAAAGGTCCACTTAACTACAAGTACAGAGATTTGAAAGCTGCAACAAAAAATTTCAGTGATGAAAATAAACTAGGAGAGGGAGGCTTTGGTGATGTATACAAGGGTACACTGAAAAATGGAAAAGTTGTTGCAGTTAAAAAATTGATTTTGGGTCAATCCACCAAGATGGAAGATGATTTTGAGAGTGAAGTCAAGCTTATCAGTAATGTTCATCATAGAAATCTGGTTAGACTTCTTGGTTGCTGTAGTAAAGGCCAAGAGAGAATTCTTGTTTATGAATACATGGCAAATAGCAGCCTTGACAGATTCTTATTTGGTAACAAAAAAGGTTCCCTCAACTGGAAACAAAGGTATGGTATAATTTTAGGCACTGCAAGAGGACTAGGCTATCTGCATGAGGAATTCCATGTTTCTATCATACATAGAGATATAAAGACAGGAAATATTCTCTTAGATGATGATTTTCAGGCCAAAATCGCTGATTTTGGGTTGGCGCGACTTTTACCGGGGGATCGTTCTCATCTAAGCACGAGATTTGCAGGAACATTGGGATACACAGCACCTGAATATGCAATCCATGGTCAATTATCAGAGAAAGCTGATACCTATAGTTATGGTATTGTTGTCCTTGAAATAATAAGTGGTATCAAAAGTACTGACGTGAAGATTGATGATGATGGTCATGAATACCTTCTTCAACGAGCATGGAAATTATATGAGAGAGGCATGCACTTGGAGTTGGTGGACAAGGACTTGGACCCTGATGAATTTGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGCTCTGTTGTGCACTCAAGCATCCGCTGCGGCGAGGCCAACAATGTCTCAAGTAGTAGTGCTACTCATAAGCAAGAGTTTACTGGAACACTTGCAACCAAGTATGCCTGTGTTTGTTGACTCGAATCTAAGGGCTCGAGAGGAAAAATCTACTTCAACCGGTGGTTCTTCTACATCTAATGCCACTGCCTCCATTTCTGTTCTATCGGCACGATGA 1938 0.4014 MMLQLTLIWCLTWLSTNHHGAVADPQTRLLNTGCSPFNVTTNNLHTFFGSINGTLSEIRAQVSNQSKHFATAQEAKGEILAFSMFQCRNYLSKKNCLGCFDTATTQIQNCSHANGARIIYDGCFLRYESESFYDQTTQPGNGVSCGNKTAKETQFDATGKQALLNLQIATPRIKGFYAATKTQVGGSAIYATAQCVETATENDCLACMVVGYNNLQTCLPNTDGRAYDAGCFMRYSETAFFADNQTIDITSYLKQGGGSTKKWAIIGGGVGGVSLVVILLTLFVCHRRSKKPKRAPRGDILGATELKGPLNYKYRDLKAATKNFSDENKLGEGGFGDVYKGTLKNGKVVAVKKLILGQSTKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGNKKGSLNWKQRYGIILGTARGLGYLHEEFHVSIIHRDIKTGNILLDDDFQAKIADFGLARLLPGDRSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGIKSTDVKIDDDGHEYLLQRAWKLYERGMHLELVDKDLDPDEFDAEEVKKIIEIALLCTQASAAARPTMSQVVVLLISKSLLEHLQPSMPVFVDSNLRAREEKSTSTGGSSTSNATASISVLSAR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0243 645 Pfam Salt stress response/antifungal 148 237 IPR002902 -
Lan4g0243 645 Pfam Salt stress response/antifungal 41 129 IPR002902 -
Lan4g0243 645 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Lan4g0243 645 SUPERFAMILY Protein kinase-like (PK-like) 307 596 IPR011009 -
Lan4g0243 645 CDD STKc_IRAK 330 593 - -
Lan4g0243 645 MobiDBLite consensus disorder prediction 622 645 - -
Lan4g0243 645 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Lan4g0243 645 ProSiteProfiles Protein kinase domain profile. 324 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0243 645 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 639 - -
Lan4g0243 645 ProSiteProfiles Gnk2-homologous domain profile. 137 240 IPR002902 -
Lan4g0243 645 SMART serkin_6 324 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0243 645 Gene3D - 26 132 IPR038408 -
Lan4g0243 645 Gene3D - 142 240 IPR038408 -
Lan4g0243 645 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 17 639 - -
Lan4g0243 645 Gene3D Transferase(Phosphotransferase) domain 1 401 606 - -
Lan4g0243 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Lan4g0243 645 Pfam Protein tyrosine and serine/threonine kinase 327 594 IPR001245 GO:0004672|GO:0006468
Lan4g0243 645 Gene3D Phosphorylase Kinase; domain 1 291 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0243 Lan-Chr4 4013333 4019305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0243 2 640 Receptor kinase-like Gene Family AT1G70520 37.942 4.37e-134 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g0243 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0243 - - vun:114187094 918.687