Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0234 ATGGTTTCTGCTGCTATGGTGATTCAGGATCAAAGTGGTGTTACCGGATCACAGAGTGGTCCTCCTCAAGGAGATGAAGTGTCCATGAGTTCTGGACTGCATTCTGTTGCACTCTTTCAGCTAAATGATCAGTTTCCCTGTGAAAATGACTATGCTCCAAAGGTAAGGAAACCATATACTATCACAAAGCAGCGAGAGAGATGGACCAATGAAGAACATAAGAAGTTCCTTGAAGCTTTAAAGCTTCATGGTCGGGCCTGGCGACGCATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTATAAGGTTCTCCATGACTCTAGTGCGAACATTGCAAACTCAGTGGAGTCTGTTGAAATCCCTCCTCCTAGACCGAAACGAAAGCCAACACATCCTTACCCTCGTAAGCTAGTAATGACCCCTAATAAAGAAACTTCCATCCTAGAGCAGCCAATGAGGTCTACTTCTCTAAAGTCATCAGATTTTGATCAAGAAAACCAAACTCCGAAATCGGTATTATCTGCACTTGGTTCAGACAGCAGCCTTGGTTTGTCTGATTCAGATACACCAAATGGAAGCTTATCCCCAATGTCATCCATTGGTGGTGTCCATAAGACTGCATTTTCACTTTCTGAACCCAAAACACCATTTGAGGAACCTGGACTAAATGCTTATTCAGCTCCTGATGAGAAACCTCTTATGAAAGTCGGGCTTTTCCCCGAAGGAAGTGTTTCTACCAAAGAAGAGACAGCAGAAGAATCTTCTGGCCGGACTCTCAAACTTTTTGGGATGACTCTAATGGTATCAGATACATGCAGATCATCTTCTCCAACAACTAAGACATACAAACCAACAATTGTGCATTGCTTTAGCAAGGAGGATGAAATTTTGGAACTTCTTGGCCACAGTACACCAAGTGAAACATCAGCATTCTCGAAGCTAAGGGTGAGAGTGAGACCTGAAACGGGTGCAAAAGGGTTTGTGCCATATAAAAGGTGCATTGCAGATAGAGAAAACCAGTCTTCATCTTTAACCGAGGATAAGCGAGAAGTGCAACACATCAGACTTAGCTTATAG 1107 0.43 MVSAAMVIQDQSGVTGSQSGPPQGDEVSMSSGLHSVALFQLNDQFPCENDYAPKVRKPYTITKQRERWTNEEHKKFLEALKLHGRAWRRIEEHVGTKTAVQIRSHAQKFFYKVLHDSSANIANSVESVEIPPPRPKRKPTHPYPRKLVMTPNKETSILEQPMRSTSLKSSDFDQENQTPKSVLSALGSDSSLGLSDSDTPNGSLSPMSSIGGVHKTAFSLSEPKTPFEEPGLNAYSAPDEKPLMKVGLFPEGSVSTKEETAEESSGRTLKLFGMTLMVSDTCRSSSPTTKTYKPTIVHCFSKEDEILELLGHSTPSETSAFSKLRVRVRPETGAKGFVPYKRCIADRENQSSSLTEDKREVQHIRLSL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0234 368 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Lan4g0234 368 PANTHER PROTEIN REVEILLE 7-RELATED 34 294 - -
Lan4g0234 368 PANTHER PROTEIN REVEILLE 7-RELATED 327 355 - -
Lan4g0234 368 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 63 112 IPR006447 GO:0003677
Lan4g0234 368 MobiDBLite consensus disorder prediction 153 210 - -
Lan4g0234 368 Gene3D - 67 113 - -
Lan4g0234 368 ProSiteProfiles SANT domain profile. 63 114 IPR017884 -
Lan4g0234 368 CDD SANT 67 110 IPR001005 -
Lan4g0234 368 SUPERFAMILY Homeodomain-like 59 112 IPR009057 -
Lan4g0234 368 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Lan4g0234 368 PANTHER SWI/SNF COMPLEX-RELATED 327 355 - -
Lan4g0234 368 PANTHER SWI/SNF COMPLEX-RELATED 34 294 - -
Lan4g0234 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Lan4g0234 368 SMART sant 64 112 IPR001005 -
Lan4g0234 368 MobiDBLite consensus disorder prediction 7 29 - -
Lan4g0234 368 MobiDBLite consensus disorder prediction 125 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0234 Lan-Chr4 3827610 3830366 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan4g0234 Myb_DNA-binding 8.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0234 - - lang:109345156 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0234 4 3827610 3830366 Lan2g1070 2 21959395 21962792 LSH