Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0230 ATGGCACCTGTTTCATTGCCTCCAGGGTTTAGATTCCACCCCACAGACGAAGAGCTTGTTGCATATTACCTCAAAAGAAAGATCAATGGCCATAAGATTGACTTAGAGATTATTCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCCGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCCCGTGATAGGAAGTACCCAAATGGATCAAGAACCAATCGTGCAACAAAATCAGGATATTGGAAGGCTACAGGGAAAGATCGAAAGGTAAATTCGCAAACTCGTGCGGTGGGAATGAAGAAAACCCTAGTTTACTATAGAGGCAGAGCACCACATGGATCTCGAACAGGTTGGGTTATGCATGAATATCGTCTTGATGAGAGGGAATGTGAAATTGCTAATGGCTTACAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTCTAGTGGTTACCCCTAAAGTTGGAGAGCATTATGTTAATGTAACCAGCCATGCAAGTCACCTAACAAGTGATCCATCATCAAGCATAGAGTTATACTCTGAAGGAAGAGAAGAAGTTTTGGAAAACTCAAATTATATAAAGCCATGGGATTATTGCTCAACCCAAAACATGGGTGGAACTTCAGTCAATATCAATGGTGGAACAAGGGATAATGGGAAATGGTCACCCTTCTTTTCTGAAGACCCGTTACTCAATTTTCCAACATCTTCATTTCCCAACTATGGAGCATTACCTTGTCCTCCATCAAAGGTGAATATAGCACTAGAGTGTGCAAGAATGCAACATAGGTTTTCCATGCCTCCATTGGAGATGGAGGACTTCCCTTCAATGTCTGAAAACAGAAATGGAATAGATATCTTGCAAGAAATTCTCTCAGTTTCTCAAGCCCAGGAACTGATTAATCAATCCAATAATTCACAGGCATTGAGTTGCAATCAAAATTATTATGGGACACATGATCAAGGTGATTTTTCATTTATGGCTGGCACTAATGACAATCACATAAACGATGTGAACTCCATGAGATTTGTTGACCAAACATGGGAAGATCAAAAGACCAGATCAGTGGAGATTGGAGATTTTGATGATGAATTCAAGGGAGAGAGGATGATAGAGAACTTAAGATGGGTTGGAATGTCAAGCAAAAGTTTTGAGAAGAGCTTTATGGAAGAGCAAAAGGTTGTCCCAGTTCAGCATATTTCAAGCATACAAATAAACAGTGAAGAGAATAATTTGCAAGAATCTGAGCAACACAATTGCAGCAAAGAACTCAGTGACACAGACATAAACGATTTCTCATTAGGGTTCATCAATGACAATGACCCTAACAACTTCATAGACGACAGTAACATTGATTATTCAAATTCTACAGGCTTTGAAGTTGTTGAGGAAACCAAAATGTTTGTTTCAACTGGTCCGGTAGCTGAAACATTCTTTCACCAAATAGTTCCTTCACAAACTGTGAAAGTTCAACTCAATCCTATAATGACAAATAACCATTATATAGAGAATAATGCCGAGACAAAGATGAAACTGAAGAACCAATGGATTTTCTTTAGGAACTTCAATGCAATGGCAAATGCCATTGTATTCATCTTTGCACTTTTGTTAATGCATTGTGTTTATTTGAAGGAGCAAGTAGTGGAAAATTGGAATCTAGACCCTAAGGTAGAGGTTGTGGAAAATTGGAAGGAACAAGAAAATGTTTGGTTTGTTGTTATCAAAAGTGAGAAAGGGTTTAGTGTGGTTTTGAAGAAGATAGGCATTTTCCTCACCATATCCTTTGCTCTAGTTACTATGTGGGCTAACCTCATCATAGTTAACACTTAA 1860 0.3887 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHKIDLEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECEIANGLQDAYALCRIFKKSLVVTPKVGEHYVNVTSHASHLTSDPSSSIELYSEGREEVLENSNYIKPWDYCSTQNMGGTSVNINGGTRDNGKWSPFFSEDPLLNFPTSSFPNYGALPCPPSKVNIALECARMQHRFSMPPLEMEDFPSMSENRNGIDILQEILSVSQAQELINQSNNSQALSCNQNYYGTHDQGDFSFMAGTNDNHINDVNSMRFVDQTWEDQKTRSVEIGDFDDEFKGERMIENLRWVGMSSKSFEKSFMEEQKVVPVQHISSIQINSEENNLQESEQHNCSKELSDTDINDFSLGFINDNDPNNFIDDSNIDYSNSTGFEVVEETKMFVSTGPVAETFFHQIVPSQTVKVQLNPIMTNNHYIENNAETKMKLKNQWIFFRNFNAMANAIVFIFALLLMHCVYLKEQVVENWNLDPKVEVVENWKEQENVWFVVIKSEKGFSVVLKKIGIFLTISFALVTMWANLIIVNT* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0230 619 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lan4g0230 619 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 315 - -
Lan4g0230 619 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Lan4g0230 619 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Lan4g0230 619 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 315 - -
Lan4g0230 619 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0230 Lan-Chr4 3758423 3763254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0230 1 610 NAC Transcription Factor Family AT1G65910 43.333 2.88e-156 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan4g0230 NAM 1e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0230 4 3758423 3763254 Lan16g0593 16 7190279 7195013 LSH