Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0203 CCCTCTCATTCTCCCTATCACTCCTCACTGTCATTCTTTCTCTCTCCTCACTCCCTTCCCTTTCTCTCTACAAACTCCTTCATCTACATTGGTTGCACACAACAACGCTACACCCCAAGCTCCCCCTACAAGTCAAACCTCAACTCTTTCCTCACCTCACTCACAAACTCAGCCACATACTCCTCCTACAACCACTTCTCCATCGTGGGAGGCGTCGCCTCCCACGACGTAGTCTACGACCTCTACCAATACCGAGGCGACCTCGCCATGCTAGACTGCGCCACATGCATTGCCAACGCGGTCACCCGCGCTGGCGATCTATGCCTGCAGGCATTTGGTGGCATAGTCCAGCTGGAAGGATGTTACATAAAGTACGACAACACCAGCTTCATTGGGATGGAGGACAAGACATTGGTGCTGAAAAAGTGTGGGTCGTCGACGGGGTACAATACGAGGCAGAAGGATGTGGTTTTGGCTGCGTTGGCAGGTTCAGGTGGGGCATTCCGGGTTGGTGGGTCGGTTCAGGTGAAGGGAATGGCGCAATGTAGTGGAGACTTGAGTTTTGCGTAG 570 0.5333 PSHSPYHSSLSFFLSPHSLPFLSTNSFIYIGCTQQRYTPSSPYKSNLNSFLTSLTNSATYSSYNHFSIVGGVASHDVVYDLYQYRGDLAMLDCATCIANAVTRAGDLCLQAFGGIVQLEGCYIKYDNTSFIGMEDKTLVLKKCGSSTGYNTRQKDVVLAALAGSGGAFRVGGSVQVKGMAQCSGDLSFA* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0203 189 ProSiteProfiles Gnk2-homologous domain profile. 25 130 IPR002902 -
Lan4g0203 189 Gene3D - 24 130 IPR038408 -
Lan4g0203 189 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 21 188 - -
Lan4g0203 189 Pfam Salt stress response/antifungal 32 127 IPR002902 -
Lan4g0203 189 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 21 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0203 Lan-Chr4 3408831 3409401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0203 13 188 Pollen Coat Proteome AT4G20670 26.601 1.78e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0203 - - lang:109344546 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0203 4 3408831 3409401 Lan16g0612 16 7567868 7570559 LSH
Lan4g0203 4 3408831 3409401 Lan11g0311 11 2025648 2027891 PCT
Lan11g0311 11 2025648 2027891 Lan4g0203 4 3408831 3409401 PCT