Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0195 ATGGGCTTATGCACTGATTCCAGGGACTTTTCCAATGTTTCTTCTTCCACTGTAGTCACAGATCATTACCGTGACTTCAACAACAAGCTCAAATTCAGAACCTTTCTGAGAAAAATGATCTGGGATTTTGGTTTTGCATGTATTGCTAACCCAAAAAGAGCAAAAAAGAGCTCTGAGAGAAGCCACATTGGCAAAAAGATTGCAACTTTGGAGCACAACAAGGCTTGGTTGCTAGCTGAGTCTGGTGGGTGTGGTGCAGAACTCACAAATTCTGACCCTCAATCTGTTCACTCATCTTTCAGGTTCAGTTTTTGTTCTCAGGTTGAGTTGGAATCACTTAACATAAGTTCTTCAACTGCTGCAACTGTTTTGATGGTGAATTTGGATAATGGGGTTAGTGAATCTCGTGCTAAGGAACTCAAATGGAGGAGGATTGAGTCATTGGAGAGAAGCATATACCCTGTGGCACACTCCTTGATCAGGTTCACCTATGCTGAAATTCTTTCTGCTACACACAATTTCTCCAAAGGTAGAGTGTTGGGGAGAGGAGCATTAAGCTGTGTTTTTAGAGGAAGGGTTGGGATTTTGAGGAATGCTGTTGCAATTAAACGGTTGGACAAAGAAGACAAGGAGTCTGCCAAGGCCTTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGCCCCAATGTTGTTCCCCTTGTCGGGTTTTGTATTGACCCTGAAGAGGGTTTGTTCTTGGTGTACAAGTATGTCTCAGGTGGCAGCTTGGAGCGTCACTTGCACGGTAGGAAGAAGAAGTATAGTTCACCACTTCTATGGTCTGCGAGGTATAAAGTTGCAATTGGGATTGCAGAAGCCATGGCTTATCTGCATAATGGAACTGAAAGATGTGTTGTTCACCGAGACATTAAGCCCTCAAACATTCTGCTTTCCTCTAAGAAGACACCCAAGCTATGTGATTTCGGATTAGCTACATGGACTTCTGCACCTTCCGTTCCTTTCCTCTGCAAAACTGTCAAGGGAACATTTGGATATCTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAAACTGATGTCTACGCTTTTGGAGTGGTTTTATTGGAACTCATAACTGGCCGGAAGCCAATTGAGGCAAAAAGGCCTCCGGGAGAAGAGAACTTGGTCTTATGGGCTAAACCTTTTCTACAGAAAGGTAAAGGAGCCATCGAAGAGTTACTTGATCCTCAACTGAATTGCAGTTTGAGATTCTCGAATCAAATTGGTCAAATGATTGAAGCAGCAGCTGCCTGTGTAACGAATGAAGAATCTCGGAGACCTGGCATAAATGAGATTATTGCGATACTGAAAGGCGAAGAAGAACCTGTTTACTCTAAAAGAAAGAAGTCTGGTTTTCTTGGTAATGGATGTGTGATTGACTGTTATTCTCAATTACAACAAACAAATAATGAGATGAAAAATCACTTGGCTTTGGCAATGCTAGGAGTTTCTGAGTTTGAGGATGATGACTATCTGTATGGTAGTTAA 1536 0.4206 MGLCTDSRDFSNVSSSTVVTDHYRDFNNKLKFRTFLRKMIWDFGFACIANPKRAKKSSERSHIGKKIATLEHNKAWLLAESGGCGAELTNSDPQSVHSSFRFSFCSQVELESLNISSSTAATVLMVNLDNGVSESRAKELKWRRIESLERSIYPVAHSLIRFTYAEILSATHNFSKGRVLGRGALSCVFRGRVGILRNAVAIKRLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKKYSSPLLWSARYKVAIGIAEAMAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRPPGEENLVLWAKPFLQKGKGAIEELLDPQLNCSLRFSNQIGQMIEAAAACVTNEESRRPGINEIIAILKGEEEPVYSKRKKSGFLGNGCVIDCYSQLQQTNNEMKNHLALAMLGVSEFEDDDYLYGS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0195 511 Gene3D Transferase(Phosphotransferase) domain 1 252 467 - -
Lan4g0195 511 SMART serkin_6 174 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0195 511 Gene3D Phosphorylase Kinase; domain 1 158 251 - -
Lan4g0195 511 Pfam Protein kinase domain 175 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0195 511 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 13 509 - -
Lan4g0195 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Lan4g0195 511 ProSiteProfiles Protein kinase domain profile. 174 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0195 511 SUPERFAMILY Protein kinase-like (PK-like) 153 452 IPR011009 -
Lan4g0195 511 PANTHER OS01G0750732 PROTEIN 13 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0195 Lan-Chr4 3257815 3261234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0195 162 489 Trihelix Transcription Factor Family AT1G70460 40.419 5.59e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan4g0195 Pkinase 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0195 - - gmx:100786826 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0195 4 3257815 3261234 Lan16g0628 16 7962501 7965780 LSH