Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0151 ATGTCTTCTTCTACTACTAATGCAGTCACTATCCTTGAAAAACGCATCGTTTTCCCTGAACAAAAATCCACTCTCTCAGACCTCAAGCTTTCAATATCAGACCTCAACATGATTTGTTGCCACTACATCCAAAAGGGATGTCTCTTCACTAATCCTTCAATTCCCTCTCACACTCTCATCTCTCTCCTCACTAACTCACTCTCACGCGCTCTTTCCATCTTTCCCCCACTCGCTGGTCGTTTCTTAACCGACTCCGACGGTTACATTTACATTACTTCCAACGACGCCGGCGTTGATTTCGTCCACGCCACCGCCACCGACCGTCGCATCGCTGATCTCTTGTCTCCAACTGATGTTCCTCACTTATTCAAGGAACTGTTTCCATATGACAAGAAAATCAACTACGACGCGCATTTTTCCCCGATCTTGGCCGTTCAGGTAACTGAACTCGCTGACGGTGTCTTCATCGGCTGCGCTGTCAGCCACGCCGTCGTTGATGGTACCTCCTTATGGAACTTCTTTAACACCTTCGCTGAAGTTACCGGAGGAGCTACGAGTGCTTCAAGGCTCCCGGACTTTCGCCGGGAAAGCATTCTGGTCTCCAATGCAGTTCTCCGGTTGCCGGAAGGTGAAATCAAGGTGGCTTTCAACGCCGACGAACGGAAGCGTGAGAGAATTTTCAGCTTCAGCTACGTCTCACTTCAAAAACTGAAAGCATTAGTGAACTACCGGTCACTGCCGGAGAACGTTGACGTTGAGTGGATAGGGAAAGAGAGCAACGATACTAACGTAAAACCAGTTACACGTAACGAAACGGTTGAGATTTCGTCGTTTCAGTCTTTATGTGCGTTAATGTGGCGTGCAGTGACACGTGCGAGGAACCTTCCAGAAACGAAAACGACGACGTTTCGAATGGCAGTGAACATTCGCCACAGATTAGAGCCAAAGTTAAGTGCCTACTACTTCGGGAACGCAATTCAAAGCATAGCGACACGCGCTTCCGCGCGTGACGTGTTATCAAATGATCTACGTTGGTGTGCGGAGCAACTGAACAAGAACGTGAATGCGCACGATAGCACTACGGTGCGACGAGAAGTAGAGGATTGGGAGCGTGAACCCAAGTGTTTCGCGCTGGGGAACAAAGATGGTGCAACGATGCAAATGGGGAGTTCACCGAGATTTCCAATGTATGATAATGATTTCGGGTGGGGAAGGCCTGTGGCAGTGCGGAGTGGCGCAGCGAATAAGTTTGATGGGAAGATGTCGGCGTTTCCGGGGAGGGAAGGCGGTGGCTCCGTCGATTTGGAGGTGGTTTTGGCGCCAGAGACGATGGCGGGGATTGAGAATGATCCTGAGTTCTTGCTTTATGCATCTGGTTGA 1380 0.4978 MSSSTTNAVTILEKRIVFPEQKSTLSDLKLSISDLNMICCHYIQKGCLFTNPSIPSHTLISLLTNSLSRALSIFPPLAGRFLTDSDGYIYITSNDAGVDFVHATATDRRIADLLSPTDVPHLFKELFPYDKKINYDAHFSPILAVQVTELADGVFIGCAVSHAVVDGTSLWNFFNTFAEVTGGATSASRLPDFRRESILVSNAVLRLPEGEIKVAFNADERKRERIFSFSYVSLQKLKALVNYRSLPENVDVEWIGKESNDTNVKPVTRNETVEISSFQSLCALMWRAVTRARNLPETKTTTFRMAVNIRHRLEPKLSAYYFGNAIQSIATRASARDVLSNDLRWCAEQLNKNVNAHDSTTVRREVEDWEREPKCFALGNKDGATMQMGSSPRFPMYDNDFGWGRPVAVRSGAANKFDGKMSAFPGREGGGSVDLEVVLAPETMAGIENDPEFLLYASG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0151 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 457 - -
Lan4g0151 459 SUPERFAMILY CoA-dependent acyltransferases 54 184 - -
Lan4g0151 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 457 - -
Lan4g0151 459 Pfam Transferase family 8 453 - -
Lan4g0151 459 Gene3D - 219 450 IPR023213 -
Lan4g0151 459 Gene3D - 9 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0151 Lan-Chr4 2397248 2398836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0151 9 449 Monolignol Biosynthesis Gene Families AT5G48930 28.261 1.57e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0151 - - cam:101506439 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0151 4 2397248 2398836 Lan2g1131 2 22567071 22568850 PCT
Lan4g0151 4 2397248 2398836 Lan9g1321 9 20470635 20472486 PCT