Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0119 ATGGAAGGCCAATCAGCTAAACGCAGACGTGTTTACTCACTAGAACCCAACAATGTGGAACAAGCAGTGTTTACTACAGACTATGTGAACTATTTAGTTCCATCTTTGATGAAGATCAAGAAATGTAGTTTCTCTGGACACAACAAACAGTGTAATTTTCAGAATATTGTGAAGCATGAAGTGGACATGGCAATGGTCTTCTCAGCGCAAGGTTTTGCATGGAGTGGTGCTCTAAAAGTGAAGCTACTAAGGAGTAATGATGTCAATGTTTATAGTAGTAGCACTACCTTTGCTGAAAATGAAGCTAGTGAAAAAGGTTCAATGGTTCTATTGGATTTGATGTCTTCAAACCCTAGCTCAAAGTCTCAGGAGGGAAAGATTTTAGTGAAAATGTCCAAGTACAATGACATGCCAGAAAAGAAAAAGGGTTTAGAAGGAGAAGATAATGAAGATGAGGTCATGAATAACCAGTTTAGGTGCCTGAGAAAGTTGATACCTGGAGGAGAAAAGATGTGTAATGAACAAATGGTTATGGAACTAGAGAGCTATATAAGCTGTTTGCAAATGCAGGTGAATATTCTTCAATGCCTCACAGAGACATCATGA 606 0.3845 MEGQSAKRRRVYSLEPNNVEQAVFTTDYVNYLVPSLMKIKKCSFSGHNKQCNFQNIVKHEVDMAMVFSAQGFAWSGALKVKLLRSNDVNVYSSSTTFAENEASEKGSMVLLDLMSSNPSSKSQEGKILVKMSKYNDMPEKKKGLEGEDNEDEVMNNQFRCLRKLIPGGEKMCNEQMVMELESYISCLQMQVNILQCLTETS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0119 201 CDD bHLH_AtIBH1_like 144 198 IPR044549 GO:0006355
Lan4g0119 201 PANTHER TRANSCRIPTION FACTOR BHLH146 3 200 - -
Lan4g0119 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 200 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0119 Lan-Chr4 1818507 1819226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0119 7 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.000 1.20e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0119 - - aprc:113852314 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1239 1 22235292 22236053 Lan4g0119 4 1818507 1819226 PCT
Lan4g0119 4 1818507 1819226 Lan1g1239 1 22235292 22236053 PCT