Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0114 ATGAAGTATATTCGGAACAACAGCTTCAAGAGGTTCTTCTCCTTTGGAAGAAGAAGATATCTTAGTGAAGAAAATGATAAGAGATTGGTGAACCTTCAATATGAAGAACACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGAAGAGTTGTTTCATGCCACCAATGGCTTCACCTCAGAAAATATGGTTGGAAAAGGAGGGTATGCAGAGGTTTACAAGGGAACACTGTATAGTGGTGAGGAAATTGCAGTGAAGAGGTTAACAAGAACTTCAAAGGGTGAGAGGAATGAGAAGGAGTTTCTCAATGAGATTGGTACAATTGGTCATGTGTGTCATTCCAATGTGTTACCACTTCTGGGGTGTTGCATTGACTATGATCTTTACCTTGTTTTTGAACTATCCACAGTTGGTTCTGTTGCTTCCCTTATTCATGATGAAAATTTGCCTCCTATGGATTGGAAAACAAGGCATAAGATAGTTCTTGGAACTGCACGCGGTCTCAACTATTTACACAAAGGTTGCCAAAGGAGAATAATTCATAGAGACATCAAGGCATCAAATATTCTACTAACAGCAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAGTGGCTTCCATCACAATGGACTCATCATTCAATAGTCCCAATAGAAGGAACATTTGGGCATTTGGCACCTGAGTACTACATGCATGGAGTTGTGGATGAGAAAACAGATGTTTTTGCCTTTGGTGTGTTCTTGTTAGAAGTTATCTCTGGGAGAGAACCAGTAGATGGGTCTTACCAAAGCTTGCATAGTTGGGCTAAACCAATATTAAACAATGGGGAGATAGAAAATCTGGTAGATCCAAGGCTTGAAGGAGCTTATGATTTAACACAGTTTAGAAGACTTGCTTTTGCAGCCTCCCTTTGCATCCGTGCATCTTCAACTTGGAGACCTACCATGAGTGAGGTATTAGAGGTAATGGAGGAAGGGGAGATGGATAAAGAGAAATGGAAAATGGCAGAAGAAGAAGAACATCAAGAGCAAAACTACTGGGAATTTGAGGATCTTGAATATGACTATGACAGTTCCCTTTCAATATCCATTCATGACTCAACCAGAAGTACTTAG 1122 0.4011 MKYIRNNSFKRFFSFGRRRYLSEENDKRLVNLQYEEHPPRPSWKCFSYEELFHATNGFTSENMVGKGGYAEVYKGTLYSGEEIAVKRLTRTSKGERNEKEFLNEIGTIGHVCHSNVLPLLGCCIDYDLYLVFELSTVGSVASLIHDENLPPMDWKTRHKIVLGTARGLNYLHKGCQRRIIHRDIKASNILLTADFEPQISDFGLAKWLPSQWTHHSIVPIEGTFGHLAPEYYMHGVVDEKTDVFAFGVFLLEVISGREPVDGSYQSLHSWAKPILNNGEIENLVDPRLEGAYDLTQFRRLAFAASLCIRASSTWRPTMSEVLEVMEEGEMDKEKWKMAEEEEHQEQNYWEFEDLEYDYDSSLSISIHDSTRST* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0114 373 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Lan4g0114 373 Pfam Protein tyrosine and serine/threonine kinase 61 322 IPR001245 GO:0004672|GO:0006468
Lan4g0114 373 SMART serkin_6 58 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0114 373 PANTHER OS08G0249100 PROTEIN 26 355 - -
Lan4g0114 373 Gene3D Phosphorylase Kinase; domain 1 20 133 - -
Lan4g0114 373 Gene3D Transferase(Phosphotransferase) domain 1 136 354 - -
Lan4g0114 373 PANTHER OS04G0654600 PROTEIN 26 355 - -
Lan4g0114 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lan4g0114 373 ProSiteProfiles Protein kinase domain profile. 58 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0114 373 SUPERFAMILY Protein kinase-like (PK-like) 38 325 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0114 Lan-Chr4 1737911 1741288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0114 30 344 Receptor kinase-like Gene Family AT1G60800 40.615 9.25e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan4g0114 PK_Tyr_Ser-Thr 5.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0114 - - gmx:100804983 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1034 12 17007094 17010363 Lan4g0114 4 1737911 1741288 PCT
Lan1g0375 1 2938610 2942075 Lan4g0114 4 1737911 1741288 PCT
Lan4g0114 4 1737911 1741288 Lan12g1034 12 17007094 17010363 PCT
Lan4g0114 4 1737911 1741288 Lan1g0375 1 2938610 2942075 PCT