Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0093 ATGGAACCAAGAATGAGGGTTTCAATGTTTTCACTTGTGTTAGTGTTTTTCTTTTGCTTTTCACTTATATCAAGTGTTCATAGCTATGAAAGCATCTTAGACAATGAAGGAACTCTGAGAGTGCTTTTGGAAGTGAAATCATCGTTTGTTTCAGACCCAGAAAATGTTTTGAGTGATTGGTTAGAGAAAAACGAAGATTATTGTAGTTGGAGAGGTGTAACATGCGAAGAGTTTTTGCATGACTCGGTGCATGCAGTTGTTGGACTCAACCTTTCTGACTCGTCACTCACTGGGTCAATATCACCATCACTCGGTCGTTTGCAAAATTTACTGACCCTTGATTTATCTTTGAACAATCTCAACGATCCAATTCCAACTACACTTTCCAACCTCACTTCATTGCAATCTCTCATTCTCAACTCTAACCAACTTACCGGTAACATTCCCACTGAGTTAGGCTCGTTACTGAGTCTCCGAGTCATGAAACTCGGTGACAATGAACTCACTGGTGTGATTCCCGTTTCCCTTGGGAATCTCGTTAACCTTGTCACCCTTGGATTGGCCAAATGTAAACTCACTGGGTTGATTCCAACTCAACTCGGTCAACTCAGTGAGTTAGAGACATTGAATCTTCAAGACAATCACTTGGTGGGACCGATTCCAGCCGAGTTAGGGAACTGCTCAAGCATCATATCACTCTCAGCTGCTCACAACACACTCAATGGTTCAATCCCGAGTGAACTGAGTCAACTCAGTAATCTCCAAATCCTCAACCTTGCCAACAACAGCATTTCAGGTGAGATTCCGAGTCAACTCAGTAAACTGAGTGAACTCATTTATCTAAATTTAATGGGAAACAAGCTTGTGGGTCATATACCAAAGTTTTTAGCTCAAATGGGTAAGCTTCAATTTCTTGATTTGTCCATGAACATGCTTAGTGGAAGTGTTCCAGAAGAGTTTGGTGATATGAGTTGGTTACAAAGTTTGATTCTTTCTTATAATCCACTCTATGGGAAAATTCCAAGTAAACTATGTGCCAATGCAACAAGTTTGGAACAATTGATGATTGCAGGAAATGGACTTCATGGTGAAATTCCATCTGAATTGGGTCAATGCAAATCACTGAAACAACTTGTTTTATCTGACAATTCTCTCAATGGATCAATCCCTGTTGAGATTTATGGTTTGCATGAATTAACTGATCTATTGCTTTATAACAACACCTTGGTTGGTTCAATATCTCCTTTCATAAAGAACCTCACTAACTTGCAAACACTTGCATTGTATTTTAACAATTTCAATGGTGTTATTCCTAGAGAGGTTGGGATGCTTGGGAATTTGGAAAAATTGAATCTTTATAGAAATCAGTTATCAGGGTCAATACCTGTGGAGATTGGTAATTGTTCTAGATTGCAAATGCTTGATCTTTATGGAAACCATTTAAGTGGTGGAATTCCTATTACTATTGGGAGGTTGAAAGAGTTGAACTTTCTTCATCTTAAGAATAATGAGCTTGTTGGTCATATTCCAGCTACTCTTGGTAATTGTCATAAACTTACTGTTCTTGATTTAGAAGGTAATCAGCTTTCAGGTGGAATTCCTGCAACATTTGGATTTCTCAGATCATTGGAGCAGTTCATACTCTTTAACAATTCTCTTGAAGGTAACCTTCCGCGCCAACTCGCGAATTTAGCGAACCTTGTCTTTGTGAATATTGGAAAGAATAGACTAAGTGGTAGCTTGGCTCCTCTGTCTAGTTCTTTGTCTATTCAGTCTTTTGATGTCACAGATAATGCATTTAGCAGTGAAATTCCTTATCTATTTGGGAACTCACCCTCCCTTCAGAGGCTAAGATTAGGTAACAACAAATTTTCTGGTGAGATTCCGAAGACATTGGGGAATATCACTGAATTATCATTGTTGGATCTCTCTGGTAATTCACTCACCGGACCGTTACCTGTTGAGCTTTCTTTGTGTAATAAACTTTCCACCATTGATTTAAACAATAATCTTCTATCCGGAAGCATACCTTCATGGCTAGGAAGTTTGCCTCATTTGGAAGAGCTTAAACTCTCATTTAATCAGTTTTCTGGGCCTATTCCACCAAGCATATTTAAATGTTCCAAATTGCTAGTCCTGTCCCTGAATGACAATTCTCTTAATGGAAGTATCCCTGGTGAAATCGGCGATCTTGCATCCCTTAATGTCCTCAAACTTGACCATAATGGTTTCTCTGGAAAAATCCCTCCTTCCATTGGTAAATTGAGCAAGCTTTATGACTTGAAGCTAGCTAAGAATAGATTTGATGGTCAAATCCCATTTGAGATTGGAAATCTTCAAAATCTCCAAAGCCTTTTAGACCTCAGTTACAATAATCTCTCTGGTTATATCCCATCTTCACTTGGGTTGCTTTCAAAATTGGAATCACTTGATCTTTCCCACAATCAACTTTCTGGAGAAGTCCCTCCTATACTAGTTGATGAAATGAGTAGCTTGGAAAAGCTTAATATCTCTTACAACAACTTCCAAGGCGAATTGGATAAGCAGTTTTCTCGCTGGCCATACGAGGCTTTCGCAGGGAACCAACATCTTTGTGGAGCCTCTCTTGGGCGCTGCAACCATGATGATGCTCATAACCTATCTGCTTCACGGGAGTCATCAGTAGCCATAGTGTCTGTCATTTCAACTTTAGCTGTAATTGCACTAATAGTACTTGTGGTGAGACTTTCCTTGAAAAACAAGCAACTCTTCTTCAGGAAAAGCAGTGAAGTGAATTGTGTTTACTCATCCTCGTCCTCACAAGCGAAGAAAAGATCGCTGTTCCTACTAAATGCTGGTGGAAGGAGAGATTTCAGGTGGGAGGATATCATGGCTGCTACAAACAATCTAAGTGATGACTTCATAATTGGTTCAGGAGGTTCGGGTACTGTCTATAGAGCTGAGTTGCACACCGGAGAGACTGTGGCCGTCAAGAAGATTTCACGGAAAGATGATTATCTTTTGAACAAAAGTTTCATCAGAGAAATCAAGACTTTGGGGAAAATTAGGCATAGACATTTGGTAAAACTAATAGGTTGTTGTCGAAACAGAAACAAAGGAACAGGCTGCAATCTCTTGATTTATGAGTATATGGAGAATGGGAGTGTATGGGATTGGCTACATGGAAAACCTATAGCAAAGGGAAGCCTTGATTGGGACACAAGGTTCAAAATTGCTGTGGGGTTAGCTCATGGAGTTGAGTACCTTCATCATGATTGCGTGCCGAAGATCATTCACAGGGACATCAAATCCAGCAACTTATTGCTAGATTCCAAAATGGATGCACACTTGGGAGATTTTGGGTTGGCTAAAGCACTCATTGAGAATTCTGACTCTAATACTGAGTCTAATTCTTGTTTTGCTGGATCTTACGGTTACATAGCCCCCGAATTTGCATACTCAATGAAGGCAACAGAAAAAAGTGATGTTTACAGCATGGGAATTGTGTTTATGGAACTAGTTTGTGGGAAAATGCCAACTGATGCTGCTTTCGTAGGAGATATGGACATGATGAGATGGGCGGAGACGCATATTCATATGCATGGCGCTGCCCGCGACGAATTGATAGATCCCGAGCTGAAACCTCTTTTACCTGCTGAAGAGTTTGCTGCATTTCAAGTTCTTGAGATAGCCATGCAATGCACCAAAACCATACCACAGGAGAGGCCATCGTCGCGACAAGTATGTGATCTTCTTCAGCATGTACTCAAAAACAAAAGGGTGGACTTTGAGAAGATGAAGTTGGATCATAACTAA 3795 0.4011 MEPRMRVSMFSLVLVFFFCFSLISSVHSYESILDNEGTLRVLLEVKSSFVSDPENVLSDWLEKNEDYCSWRGVTCEEFLHDSVHAVVGLNLSDSSLTGSISPSLGRLQNLLTLDLSLNNLNDPIPTTLSNLTSLQSLILNSNQLTGNIPTELGSLLSLRVMKLGDNELTGVIPVSLGNLVNLVTLGLAKCKLTGLIPTQLGQLSELETLNLQDNHLVGPIPAELGNCSSIISLSAAHNTLNGSIPSELSQLSNLQILNLANNSISGEIPSQLSKLSELIYLNLMGNKLVGHIPKFLAQMGKLQFLDLSMNMLSGSVPEEFGDMSWLQSLILSYNPLYGKIPSKLCANATSLEQLMIAGNGLHGEIPSELGQCKSLKQLVLSDNSLNGSIPVEIYGLHELTDLLLYNNTLVGSISPFIKNLTNLQTLALYFNNFNGVIPREVGMLGNLEKLNLYRNQLSGSIPVEIGNCSRLQMLDLYGNHLSGGIPITIGRLKELNFLHLKNNELVGHIPATLGNCHKLTVLDLEGNQLSGGIPATFGFLRSLEQFILFNNSLEGNLPRQLANLANLVFVNIGKNRLSGSLAPLSSSLSIQSFDVTDNAFSSEIPYLFGNSPSLQRLRLGNNKFSGEIPKTLGNITELSLLDLSGNSLTGPLPVELSLCNKLSTIDLNNNLLSGSIPSWLGSLPHLEELKLSFNQFSGPIPPSIFKCSKLLVLSLNDNSLNGSIPGEIGDLASLNVLKLDHNGFSGKIPPSIGKLSKLYDLKLAKNRFDGQIPFEIGNLQNLQSLLDLSYNNLSGYIPSSLGLLSKLESLDLSHNQLSGEVPPILVDEMSSLEKLNISYNNFQGELDKQFSRWPYEAFAGNQHLCGASLGRCNHDDAHNLSASRESSVAIVSVISTLAVIALIVLVVRLSLKNKQLFFRKSSEVNCVYSSSSSQAKKRSLFLLNAGGRRDFRWEDIMAATNNLSDDFIIGSGGSGTVYRAELHTGETVAVKKISRKDDYLLNKSFIREIKTLGKIRHRHLVKLIGCCRNRNKGTGCNLLIYEYMENGSVWDWLHGKPIAKGSLDWDTRFKIAVGLAHGVEYLHHDCVPKIIHRDIKSSNLLLDSKMDAHLGDFGLAKALIENSDSNTESNSCFAGSYGYIAPEFAYSMKATEKSDVYSMGIVFMELVCGKMPTDAAFVGDMDMMRWAETHIHMHGAARDELIDPELKPLLPAEEFAAFQVLEIAMQCTKTIPQERPSSRQVCDLLQHVLKNKRVDFEKMKLDHN* 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0093 1264 Gene3D Ribonuclease Inhibitor 389 484 IPR032675 -
Lan4g0093 1264 Gene3D Ribonuclease Inhibitor 38 195 IPR032675 -
Lan4g0093 1264 Gene3D Ribonuclease Inhibitor 485 584 IPR032675 -
Lan4g0093 1264 Pfam Protein kinase domain 968 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0093 1264 SUPERFAMILY L domain-like 39 341 - -
Lan4g0093 1264 SMART serkin_6 963 1250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0093 1264 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 1262 - -
Lan4g0093 1264 SMART LRR_typ_2 829 860 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 131 155 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 492 516 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 779 803 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 299 322 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 635 659 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 420 443 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 251 275 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 323 347 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 804 828 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 444 468 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 683 707 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 203 227 IPR003591 -
Lan4g0093 1264 SMART LRR_typ_2 731 755 IPR003591 -
Lan4g0093 1264 SUPERFAMILY L domain-like 347 650 - -
Lan4g0093 1264 ProSiteProfiles Leucine-rich repeat profile. 253 276 IPR001611 GO:0005515
Lan4g0093 1264 ProSitePatterns Protein kinases ATP-binding region signature. 969 992 IPR017441 GO:0005524
Lan4g0093 1264 ProSiteProfiles Protein kinase domain profile. 963 1250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0093 1264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1090 1102 IPR008271 GO:0004672|GO:0006468
Lan4g0093 1264 Gene3D Phosphorylase Kinase; domain 1 923 1043 - -
Lan4g0093 1264 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 8 1262 - -
Lan4g0093 1264 Gene3D Ribonuclease Inhibitor 196 388 IPR032675 -
Lan4g0093 1264 Gene3D Ribonuclease Inhibitor 585 880 IPR032675 -
Lan4g0093 1264 PRINTS Leucine-rich repeat signature 638 651 - -
Lan4g0093 1264 PRINTS Leucine-rich repeat signature 804 817 - -
Lan4g0093 1264 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Lan4g0093 1264 SUPERFAMILY Protein kinase-like (PK-like) 943 1245 IPR011009 -
Lan4g0093 1264 Pfam Leucine rich repeat 757 817 IPR001611 GO:0005515
Lan4g0093 1264 Pfam Leucine rich repeat 421 481 IPR001611 GO:0005515
Lan4g0093 1264 Pfam Leucine rich repeat 278 336 IPR001611 GO:0005515
Lan4g0093 1264 Pfam Leucine Rich Repeat 518 540 IPR001611 GO:0005515
Lan4g0093 1264 Pfam Leucine Rich Repeat 253 275 IPR001611 GO:0005515
Lan4g0093 1264 Gene3D Transferase(Phosphotransferase) domain 1 1044 1263 - -
Lan4g0093 1264 SUPERFAMILY L domain-like 588 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0093 Lan-Chr4 1298458 1302641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0093 165 801 Receptor kinase-like Gene Family AT1G17750 37.031 3.20e-99 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan4g0093 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0093 - - gmx:100801889 1668.29