Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0079 ATGGTCGATTCTGTTGCTCAAATCAAGAACCACAGAGACTTCACTTTGGCATCAGTTACAGAAATATCTTCTCCTTCTTTTCCTTCTTCGCCGGCCACTGCTCGCTTCAGCTCCGACGGTTCCACGGCGGAGCTACGAATTCAGCATGAATCTCATCAGATTCCTCTCCATGTTGATCTCCAAGCTGCTCAGTTATTCAAGTTAGGTCCCGTTCGATCGGTTTGCCTGCTGGAAGGGTCTGATACTGGCAAACAGACATCATATTCCAAGGGAGTGGCTATCCAGTTTAGAAATGAGGAAGAGAGTGATGCCTTCCATTGTGTATTCCAAAAAGGGAAGAAAAAATTCAATGTTCAAGGAGGAGACTTACCAAATGGAACTGATGTAATAACTTCTACAAGCAAATTTGATCAGAAGATAGAGTCATCTTCTGCGAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGATCCTATTATGCTGCAGTTATGGAGAACCGCACTGACTTCGTAGGTCGTGTAGTTGTTGACGTTGGTGCCGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGGATACGCTCAGAAACTTATAGCTGGGAACCCTTTGCTGGGTCAACGAATTACCGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGCACATTGTTAGTTAATGAAAGAATGCTGGAGTCATATGTCATTGCCAGAGATAGGTTTCTCTCTCCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCCCCATTCAGTGATGAATATTTGTTTGTTGAAATGGCTAACAAGTCCATGTTTTGGCAGCAACAAAACTATTATGGGGTTGATTTGACACCTTTGCACGGTACTGCATTTCAAGGGTACTTTTCTCAGCCTGTAGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTCCTTCAATGTTCCACGTGATAGACTTTACTAAAATAAAGGAAGAAGAGCTATATGAAATTGACATTCCTCTCAGATTCATATCCAGTGTGGGTACTAGAGTACATGGGTTGGCATGCTGGTTTGATGTACTTTTCAACGGAAGTACCGTGCAAAGGTGGCTTACCACCGCCCCAGGTTCACCTACAACACATTGGTATCAGTTACGCTGTGTTCTCTCTCAGCCAATATATGTCATGGCTGGACAAGAAATTACTGGCCGGCTGCACTTGATCGCTCACAATGCTCAGAGTTATACTATCTATTTAACATTGTCAGCTAAATCATGGGGACCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTAAAAGAACCCTACTATAGAATGTCTCAACCACAAGCTTATCCATTAACCCAAGATCAACCACTTTTATCAACAGAGGATATACACATCCAATCTGATGATTTGGATGAGCTAATGCAACAACAGCCTTCACCTAATTCATGTGCTCCCATTGACTCACAGATGAAGAATGCTTGA 1611 0.4233 MVDSVAQIKNHRDFTLASVTEISSPSFPSSPATARFSSDGSTAELRIQHESHQIPLHVDLQAAQLFKLGPVRSVCLLEGSDTGKQTSYSKGVAIQFRNEEESDAFHCVFQKGKKKFNVQGGDLPNGTDVITSTSKFDQKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGSYYAAVMENRTDFVGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAGYAQKLIAGNPLLGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLSPNGKMFPTVGRIHMAPFSDEYLFVEMANKSMFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSMFHVIDFTKIKEEELYEIDIPLRFISSVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKSWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLTQDQPLLSTEDIHIQSDDLDELMQQQPSPNSCAPIDSQMKNA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0079 536 CDD AdoMet_MTases 187 290 - -
Lan4g0079 536 MobiDBLite consensus disorder prediction 517 536 - -
Lan4g0079 536 Gene3D - 290 497 - -
Lan4g0079 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 462 IPR029063 -
Lan4g0079 536 MobiDBLite consensus disorder prediction 22 43 - -
Lan4g0079 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 141 456 IPR025799 GO:0016274|GO:0018216
Lan4g0079 536 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 10 496 - -
Lan4g0079 536 Pfam Ribosomal protein L11 methyltransferase (PrmA) 184 256 - -
Lan4g0079 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 496 IPR025799 GO:0016274|GO:0018216
Lan4g0079 536 Gene3D Vaccinia Virus protein VP39 127 288 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0079 Lan-Chr4 1029506 1036842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0079 148 437 C2H2 Transcription Factor Family AT3G12270 34.091 2.05e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0079 K05931 - gmx:100818828 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1016 1 20535546 20542645 Lan4g0079 4 1029506 1036842 PCT
Lan1g0062 1 327755 334113 Lan4g0079 4 1029506 1036842 PCT
Lan4g0079 4 1029506 1036842 Lan1g1016 1 20535546 20542645 PCT
Lan4g0079 4 1029506 1036842 Lan1g0062 1 327755 334113 PCT