Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0077 ATGGATGGTAACAAGGATGAAGCACTAAGGTGTCTTCGCATCGCAGAGGAAGCAATCGCAATCGGTAACAAAGATCGCGCTCTCAAATTCATCAAAATCGCACAACGTCTCAATAACAGTTTGCCGCTCGATTCCTTACTCAACCAGTGCCAGCGCCTCGATTCTCAATCCTCCTCCGTCACAAGCCGCGCCAGTGCTAGCAGCAGCGTGAAGAGTAAGACCCCGGTGAGCGAGGGTTTGAACGGTGAGAGAAATTATACTGATGAAAATGTTCAATTGATTAGGGAAATTAAGGGGAAATCGGATTATTATGCAATTCTAGGTGTTGAGAGAAGTTGTTCTGTTGAAGAGATTAGAAAAGCTTATAGGAAAATCTCATTGAAAGTTCATCCTGATAAGAACAAAGCCCCGGGTTCCGAAGACGCGTTTAAGAAAGTCTCTAAGGCTTTTAAGTGTTTGAGTGATGATAGTTCTAGAAGGCAATATGATCAAACAGGATTAGTTGATGAGTTTGAGTATAATCAACAGAATTACACCAATGTTAGGCGCCGAAGGCGCAGAGCTACCACTGCTCATGATTTTTTCGAGGATGAGTTTGATCCTGATGAGATATTTAGGACATTCTTTGGACAATCTAATGTGTTTGACAGAGCTCGCGTTTATAGGACACGGGCAGCAACAAGTAATCATAATAATAGGCAAGAATCTCAGGTTGGATCAGGACTTAATATAATGCTGCTTATCCAGCTCTTGCCATTCTTGCTCATTTTGTTGCTTATTTACTTGCCCTTTTCGGAACCGAACTATTCCTTGCACAAGAATTATGCATACCAGATACCAAAGACGACCGAGGAGTATGGGGTCCAGTTTTTCGTGAAATCTCAAGGTTTTGATGCTAACTATCCACCTGGAAGTCCTGCTCGTGCGAGAATTGATGAGAGTGTCGTAAAGGATTATAGGAATATGCTTCATCGTTTTTGTAAAATAGAGATGCAAAGGCGTACTTGGAATAGGAACCTGCCTGCTCCTCATTGTGAAAAGCTAAAGAGCTTTGGAGTTGCCTCGGCCTGA 1071 0.4267 MDGNKDEALRCLRIAEEAIAIGNKDRALKFIKIAQRLNNSLPLDSLLNQCQRLDSQSSSVTSRASASSSVKSKTPVSEGLNGERNYTDENVQLIREIKGKSDYYAILGVERSCSVEEIRKAYRKISLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDSSRRQYDQTGLVDEFEYNQQNYTNVRRRRRRATTAHDFFEDEFDPDEIFRTFFGQSNVFDRARVYRTRAATSNHNNRQESQVGSGLNIMLLIQLLPFLLILLLIYLPFSEPNYSLHKNYAYQIPKTTEEYGVQFFVKSQGFDANYPPGSPARARIDESVVKDYRNMLHRFCKIEMQRRTWNRNLPAPHCEKLKSFGVASA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0077 356 PANTHER AT29763P-RELATED 1 353 - -
Lan4g0077 356 MobiDBLite consensus disorder prediction 58 84 - -
Lan4g0077 356 PRINTS DnaJ domain signature 104 122 IPR001623 -
Lan4g0077 356 PRINTS DnaJ domain signature 122 137 IPR001623 -
Lan4g0077 356 PRINTS DnaJ domain signature 138 158 IPR001623 -
Lan4g0077 356 SMART dnaj_3 101 158 IPR001623 -
Lan4g0077 356 CDD DnaJ 102 155 IPR001623 -
Lan4g0077 356 ProSiteProfiles dnaJ domain profile. 102 166 IPR001623 -
Lan4g0077 356 Gene3D DnaJ domain 99 221 IPR036869 -
Lan4g0077 356 SUPERFAMILY Chaperone J-domain 98 181 IPR036869 -
Lan4g0077 356 Pfam DnaJ domain 102 163 IPR001623 -
Lan4g0077 356 Pfam Domain of unknown function (DUF1977) 265 335 IPR015399 -
Lan4g0077 356 PANTHER CHAPERONE PROTEIN DNAJ 49 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0077 Lan-Chr4 987524 991899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0077 97 163 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 5.69e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0077 K09518 - gmx:100820432 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0077 4 987524 991899 Lan16g1167 16 19007232 19008922 LSH