Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0057 ATGGCCACCGAGCCCCGCCCCCTTCCACACCCACCGCCAGTGACGGCGACAGAACTTTCAACCACCCGCAACAGCCTCCGTTTCTGGCAGTTAATGGTAGCCGGTTCCATTGCAGGCTCCGTCGAACACATGGCAATGTTCCCCATCGACACCGTGAAGACCCACATGCAAGCACGTTCATCATCGTGTCCCATCAAAACATCCTTAACCGTTCGCCAAGCCGTTGGATCCATTCTCAAATCCAACGGTCCATCTGCTCTGTACCGCGGCATCGGAGCAATGGGTCTCGGTGCGGGACCCGCACACGCCGTTTATTTCTCGTTCTACGAGACTTGTAAGAAGTTTCTCTCTCGCGGGAACCCCAACAACGCTTCCGCACACGCGGTTTCTGGCGTGTGTGCCACAATCGCCAGTGATGCGGTTTTTACACCTATGGATATGGTGAAGCAGAGGCTGCAATTGAGTGGTGGTGGTTACAATGGTGTTTGGGACTGTGTTAAGAGGGTGTTGAGGGAGGAAGGGTTTGGTGCGTTCTATGCGTCTTATAGGACTACTGTTTTGATGAATGCTCCGTTTACTGCTGTGCATTTCGTGTCATATGAGGCCGCGAAACGAGCTTTGATTGAGGTTTCGCCGAGTAGTGTTGATGATGGAAGGTTGATTGTTCATGCTACTGCTGGTGCTGCTGCTGGTGCTTTGGCTGCTTCGGTTACAACGCCGCTTGATGTGGTGAAAACTCAACTGCAGTGTCAGGGTGTCTCTGGATGTGATAGGTTTAAAAGTGGTTCAATTGGGGATGTTTTTAAAACTATAGTAAAAAAGGATGGATATAGAGGGCTCATTCGAGGATGGATTCCAAGGATGCTCTTCCATGCCCCCGCGGCTGCAATCTGCTGGTCCACATATGAAGCTGGCAAGACCTTCTTCCACGAATTTAATCAGAGTTAA 948 0.5116 MATEPRPLPHPPPVTATELSTTRNSLRFWQLMVAGSIAGSVEHMAMFPIDTVKTHMQARSSSCPIKTSLTVRQAVGSILKSNGPSALYRGIGAMGLGAGPAHAVYFSFYETCKKFLSRGNPNNASAHAVSGVCATIASDAVFTPMDMVKQRLQLSGGGYNGVWDCVKRVLREEGFGAFYASYRTTVLMNAPFTAVHFVSYEAAKRALIEVSPSSVDDGRLIVHATAGAAAGALAASVTTPLDVVKTQLQCQGVSGCDRFKSGSIGDVFKTIVKKDGYRGLIRGWIPRMLFHAPAAAICWSTYEAGKTFFHEFNQS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0057 315 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Lan4g0057 315 PRINTS Mitochondrial carrier protein signature 44 58 IPR002067 GO:0055085
Lan4g0057 315 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Lan4g0057 315 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Lan4g0057 315 PRINTS Mitochondrial carrier protein signature 179 197 IPR002067 GO:0055085
Lan4g0057 315 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Lan4g0057 315 Gene3D Mitochondrial carrier domain 124 315 IPR023395 -
Lan4g0057 315 PANTHER MITOFERRIN-1-RELATED 19 314 - -
Lan4g0057 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 206 IPR018108 -
Lan4g0057 315 SUPERFAMILY Mitochondrial carrier 25 303 IPR023395 -
Lan4g0057 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 308 IPR018108 -
Lan4g0057 315 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 19 314 - -
Lan4g0057 315 Pfam Mitochondrial carrier protein 220 311 IPR018108 -
Lan4g0057 315 Pfam Mitochondrial carrier protein 25 118 IPR018108 -
Lan4g0057 315 Pfam Mitochondrial carrier protein 123 208 IPR018108 -
Lan4g0057 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 115 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0057 Lan-Chr4 720740 723755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0057 6 313 Chloroplast and Mitochondria Gene Families AT2G30160 74.121 2.53e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0057 K15113 - gmx:100802640 488.034