Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0053 ATGTCGAAAGTGGTTTGTGTGACTGGAGCCAGCGGCGCCATTGGGTCATGGCTTGTACGCCTCCTCCTCGAGCGTGGCTACACCGTCCACGCCACCATCCAAGATCTCAAGGATGAGAAAGAGACCAAGCATTTGGAGGCAATGGAAGGAGCTAAGACTCGTCTTCGCTTTTTCCAGATGGATCTTCTTGACAGCGACTCCATCGTCGCTGCCGTAAAGGGTTGCGCCGGAGTTTTCCACCTTGCATGTCCTATCATCACTAGTCAAGTCAAAGATCCTGAGAAGGAGATGTTGGAACCGGCCATTAAAGGGACAATTAATGTGCTGAAAGCAGCGAAGGAAGCAGGGGTAGAGCGTGTGGTGGCGACATCATCAACCTCGTCCATAATTCCAAATCCTAGCTGGCCTGCTGATAAGATTAAGGATGAGGAATGTTGGACGGATCTTCAATACTGTAGGGAGAAAGGGTTACATTATCCCATTGCAAAGACTCTTGCGGAGAAAGAAGGTTGGGATTTTGCTAAGGAGACAGGTTTGGATGTAGTAATGATAAATCCTGGAACAGCCTTGGGCCCTCTGATTCCACCAAGAATAAATTCCAGCATGGCTGTGCTTGTTGAAGTTCTCAAAGGGGACAAAGAGACGTACCCAGATTTCTATATGGGAACAGCCCACTTTAAAGACATAGCCTTGGCACATATTTTGGCCTATGAAAAAAAGAACGCTGCTGGAAGACACTTGTGTGTTGAAGCAATTCGTCACTATGGTGATTTTGTGGCCAAGGTTGCTGAGTTATACCCTCAATATAATGTGGCTACGTTGCCAAAGGATACACAACCTGGGTTGTTGAGAGCAAAGGATCCATCAAAGAAGCTGATTGATTTAGGTCTTGAGTTCACTCCGATCGATGAAATTATTAAGGATGCAGTGGAAAGTTTGAAGAGCTTAGGTTATGTCTAA 960 0.4635 MSKVVCVTGASGAIGSWLVRLLLERGYTVHATIQDLKDEKETKHLEAMEGAKTRLRFFQMDLLDSDSIVAAVKGCAGVFHLACPIITSQVKDPEKEMLEPAIKGTINVLKAAKEAGVERVVATSSTSSIIPNPSWPADKIKDEECWTDLQYCREKGLHYPIAKTLAEKEGWDFAKETGLDVVMINPGTALGPLIPPRINSSMAVLVEVLKGDKETYPDFYMGTAHFKDIALAHILAYEKKNAAGRHLCVEAIRHYGDFVAKVAELYPQYNVATLPKDTQPGLLRAKDPSKKLIDLGLEFTPIDEIIKDAVESLKSLGYV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0053 319 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Lan4g0053 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Lan4g0053 319 Gene3D - 1 319 - -
Lan4g0053 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Lan4g0053 319 CDD FR_SDR_e 5 297 - -
Lan4g0053 319 Pfam NAD dependent epimerase/dehydratase family 5 240 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0053 Lan-Chr4 690036 694575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0053 3 319 Monolignol Biosynthesis Gene Families AT5G58490 66.562 3.86e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0053 - - gmx:100806281 537.339