Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0052 ATGGGAACAGCCCACTTTAAAGACATAGCCTTGGCACATATTTTGGCCTATGAGAAAAAGAATGCTGCTGGAAGGCACTTGTGTGTTGAAGCAATTCGTCACTATGGTGATCTTGTGGCAAAGGTTGCTGAGTTATACCCTGAATATAATGTGGCTACGTTGCCAAAGGATACACAACCTGGGTTGTTGAGAGCAAAGGATCCATCAAAGAAGCTGATTGATTTAGGTCTTGAGTTCACTCCGATCGATGAAATTATTAAGGATGCAGTGGAAAGTTTGAAGAGCTTAGGTTATGTCTAA 300 0.4167 MGTAHFKDIALAHILAYEKKNAAGRHLCVEAIRHYGDLVAKVAELYPEYNVATLPKDTQPGLLRAKDPSKKLIDLGLEFTPIDEIIKDAVESLKSLGYV* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0052 99 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 1 91 - -
Lan4g0052 99 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 91 - -
Lan4g0052 99 Gene3D - 1 99 - -
Lan4g0052 99 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 95 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0052 Lan-Chr4 664040 665116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0052 1 99 Monolignol Biosynthesis Gene Families AT5G58490 70.707 9.63e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0052 - - gmx:100806281 167.548