Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan4g0040 | ATGAAGAAAATGTGTAACATAAATAAAAGAGTTTTGATGCTATGGTTGTTTGGAATAACTATGCAGCTAGTCTTCCATGGTGGCTGTTCTGAGAATACACCATTGAGGAGAGCTTTGAGGGAAAACAATAGGCAGGAACCACCACTTTCTAATTATGCAGTGAAGCTGAATAATGAAAGTAATCATAAGTTGGTGGTTGACAATGGCATAATTTCTGTCACTTTGTCAATTCCTGAAGGCTACATTATTGGAATATCATATAATGGAATTGATAATATTCTTGAAGTTGAAAATAAAGAACAAGATAGAGGGTACTTGGATGTTGTTTGGAATGAACCTGGAAAATCATCTTCATTTGAGAGAATCCATGGGACAAAATTTTCAGTAATAACAGCAGAGGAAAATCTAGTTGAGGTTTCATTTTTAAGAATATGGGAATCTTCCATGAATGGCACAAGTGTCCCTATAAACATAGATACAAGGTACATCTTCCGAGGAAATGATTCTGGATTTTATTCATACGCAATATTTGATCGTCCGAAAGGATTGCCAGCTGTAGAAGTTGATCAAATTAGAATTGTTTTCAAGCTTCAGGAAAACAGGTTCAACTACATGGCTATAGAAGACAACATGCAAAGAATTATGCCAACAATGGAAGATAGAAAAATGGGCCAAAACTTGTCATATCCTGAAGCAATTCTATTAACCAACCCAAGTAACCCACAATTTAGAGGAGAGGTTGATGACAAATATCAATATTCAATTGAGAATAAAGACAACAAAGTACATGGTTGGATTAGTATTGATTCTGATTCACCAATGGGTTTTTGGATGATAACACCAAGTAATGAATTCAGAAATGGTGGACCCAATAAACAAGATCTCACTTCTCATGCGGGTCCCATCACCCTAAATATGTTTGTGAGTACTCACTATGCTGGAAAGGAAGTAACCATGTCATTTGAAGAAGGGGAGACATATAAAAAGGTTTTTGGTCCTGTTTTTGTTTACCTTAACTCTGCTACAACTAAAGATAGTTCACTTTCTCTTTGGTCAGATGCTGTGGATCAGCTATCAAAGGAAGTCAAAAGCTGGCCTTATGATTTTCCTAGATCACAAGATTTCATTCAACCCAATGAAAGAGGAAAAGTATTGGGAAGATTACTAATCCAAGATAGATACATCAAAGGAGGTACATTGCAGAATGCTAAAAATGCTTATGTTGGTCTTGCTTTGCCTGGAGATGCAGGATCATGGCAGAGAGAAAGCAAGGGCTATCAATTCTGGACTAGAACTGACTCAAAGGGATATTTCACAATAGAAAATATTGTACCTGGAGTTTATAATTTGTATGCATGGGTTCCTGGTTTTATTGGTGATTACAAATACAATACTTCAATCCTCATTACACAAGGAGGAGTCATGAATTTGGATAAATTGGTTTATATTCCTCCGAGAAATGGACCAACTCTTTGGGAAATCGGAGTTCCAGATCGTTCAGCCGCTGAATTCTATGTGCCAGACCCTTATCCTACTCTCATGAATAAATTATATAATGATCAACCTAGAGAGAAGTTTAGGCAATACGGTTTATGGGATCGTTATGTTGATTTATATCCAAATAATGATCTAGAATACACTATTGGTGTTAACAAGTTTAAGAAGGATTGGTTTTTTGCTCATGTTACAAGAAACATAGGAAATAATACATATGAACCAACTACATGGAAGATTATATTTGAACATGAACATGACATTTTTAGTGGAAACTACACACTACAATTGGCCTTGGCATCTGCTAAAGATGCTGAGCTACAAGTTCGGTTCAATAACCCTAGCATCAATCCACCACACTTTACAACAGGACAAATAGGTGGAGATAATGCTATTGCAAGGCATGGCTTGCATGGATTACATTGGTTATTTAGTATTGATATTTCAAGTGATTATTTTATGAAAGGAAAGAACATTATCTATATGAAGCAATCAAGAGCCATAAATTCTTTTCAAGGAGTTATGTATGATTATATTCGATTAGAAAGTCCTTGCACTTAA | 2055 | 0.3562 | MKKMCNINKRVLMLWLFGITMQLVFHGGCSENTPLRRALRENNRQEPPLSNYAVKLNNESNHKLVVDNGIISVTLSIPEGYIIGISYNGIDNILEVENKEQDRGYLDVVWNEPGKSSSFERIHGTKFSVITAEENLVEVSFLRIWESSMNGTSVPINIDTRYIFRGNDSGFYSYAIFDRPKGLPAVEVDQIRIVFKLQENRFNYMAIEDNMQRIMPTMEDRKMGQNLSYPEAILLTNPSNPQFRGEVDDKYQYSIENKDNKVHGWISIDSDSPMGFWMITPSNEFRNGGPNKQDLTSHAGPITLNMFVSTHYAGKEVTMSFEEGETYKKVFGPVFVYLNSATTKDSSLSLWSDAVDQLSKEVKSWPYDFPRSQDFIQPNERGKVLGRLLIQDRYIKGGTLQNAKNAYVGLALPGDAGSWQRESKGYQFWTRTDSKGYFTIENIVPGVYNLYAWVPGFIGDYKYNTSILITQGGVMNLDKLVYIPPRNGPTLWEIGVPDRSAAEFYVPDPYPTLMNKLYNDQPREKFRQYGLWDRYVDLYPNNDLEYTIGVNKFKKDWFFAHVTRNIGNNTYEPTTWKIIFEHEHDIFSGNYTLQLALASAKDAELQVRFNNPSINPPHFTTGQIGGDNAIARHGLHGLHWLFSIDISSDYFMKGKNIIYMKQSRAINSFQGVMYDYIRLESPCT* | 685 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan4g0040 | 684 | Gene3D | - | 378 | 478 | - | - | |
Lan4g0040 | 684 | SUPERFAMILY | Galactose mutarotase-like | 59 | 348 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
Lan4g0040 | 684 | Gene3D | - | 56 | 358 | IPR014718 | GO:0030246 | |
Lan4g0040 | 684 | Pfam | Polysaccharide lyase family 4, domain III | 490 | 679 | IPR029411 | - | |
Lan4g0040 | 684 | Pfam | Rhamnogalacturonate lyase family | 52 | 247 | IPR010325 | - | |
Lan4g0040 | 684 | SUPERFAMILY | Galactose-binding domain-like | 487 | 680 | IPR008979 | - | |
Lan4g0040 | 684 | SUPERFAMILY | Starch-binding domain-like | 424 | 479 | IPR013784 | GO:0030246 | |
Lan4g0040 | 684 | Pfam | Polysaccharide lyase family 4, domain II | 404 | 474 | IPR029413 | - | |
Lan4g0040 | 684 | CDD | RGL4_C | 492 | 680 | - | - | |
Lan4g0040 | 684 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 58 | 683 | - | - | |
Lan4g0040 | 684 | Gene3D | - | 488 | 680 | - | - | |
Lan4g0040 | 684 | CDD | RGL4_N | 59 | 347 | - | - | |
Lan4g0040 | 684 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 58 | 683 | - | - | |
Lan4g0040 | 684 | CDD | RGL4_M | 380 | 480 | IPR029413 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan4g0040 | Lan-Chr4 | 434265 | 442744 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan4g0040 | 49 | 683 | Polysaccharide Lyase | AT1G09890 | 54.075 | 0.0 | 717 |