Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0038 ATGAAGGAAAAGAAAGCGAAAACGAATACAGAAATAGTCCAAATGGAATGGATGATGGCGAATTATAGAAAAGAGTACCTTCCATGCGATGGCGACGATGTATTGTCACCAACGGGCGTATTCGAGGTTCCTATTTCGGACAGCAGTGGAAGCAGCAATTGCAGCAGCATTAGCTCGCCCGGGAAGTTATCGCCAACGGGTATGCAGCCGCGATCGCAGTGGAAGGATGGGTATAGCCAGCAATGGAAGGCCATGATTGATGGCTTGAGGTTCAAGTCTGTTAGAAGATTCTCAACCATTCCTCTGCTTGCAGCCAGCTATGAGATTTCGAGAAAAAACATGCGAAAGAAGTTGTCTCGAATTCGAGCCAGCAATGAAGATGATTATGTTGATGGCATTGATCTTGAGAATTTTCCTACAAAGCCTTCTTGGAAGAATTTCACTTATGATGAACTTGCTACTGCAACAGATGATTTTAGCTCAGAAAACTTGGTTGGAAAAGGTGGAAATGCTGAAGTCTACAAAGGATCCTTACCAGATGGACAAGTTGTAGCAGTAAAGAGGCTAATGAAGAATGAAAAAGAAGCTCAGGATAGAGCTGGTGATTTCTTGTCAGAACTCGGGATCATTGCTCATGTAAACCACCCGAATGCGACACACCTGATGGGGTTCGGGATCGACCGTGGCCTCTACTTTGTCTTACAATTCGCCCCTCATGGAAGCCTTGCTTGTTTGCTCTTTGATTCTGATTGCTTGGAGTGGAAGATAAGGTTCAAGGTAGCTATGGGGGTAGCAAAAGGATTGCAATATCTCCATCAAGATTGTCCTAGAAGAATCATTCACAGAGACATAACGGCTTCCAATATTTTACTCAACCATAATTATGAAGCTGAGATTTCAGATTTCGGATTGGCGAAGTGGCTCCCGGATAAGTGGGCACACCATGTTGTCTTCCCTATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGGATTGTCGATGAGAAGACCGATGTTTTCGCATTTGGGGTTTTGCTACTGGAGCTGTTAACAGGTCGCCGTGCCGTTGATTCAAATAGTAGGCAAAGTCTTGTGATATGGGCTAAGCCGCTGCTGGACGCGATGGAGGTCAAGGAAATAGCCGATCCAAGATTAGAAGGCAAATATGATCTCGTAGAAATGAACCGAGCCATGGCTACGGCTTCCATGTGTGTCCATCACATGTCCTCCAAGAGGCCTTACATGAATCAGGTTCTGAAGCTTCTGAACGGCGAAGAGGTGGCTGTCGAGTTCAGCAAAAAATCAATGAACCCAAGATCACTCTTGTTAGATGCATGTGACTTAGAAGACTACACATGCTCGAACTATTTGAACGATCTCAATCGCCACAAGGAACTAATCATGGAGTGA 1422 0.4494 MKEKKAKTNTEIVQMEWMMANYRKEYLPCDGDDVLSPTGVFEVPISDSSGSSNCSSISSPGKLSPTGMQPRSQWKDGYSQQWKAMIDGLRFKSVRRFSTIPLLAASYEISRKNMRKKLSRIRASNEDDYVDGIDLENFPTKPSWKNFTYDELATATDDFSSENLVGKGGNAEVYKGSLPDGQVVAVKRLMKNEKEAQDRAGDFLSELGIIAHVNHPNATHLMGFGIDRGLYFVLQFAPHGSLACLLFDSDCLEWKIRFKVAMGVAKGLQYLHQDCPRRIIHRDITASNILLNHNYEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELLTGRRAVDSNSRQSLVIWAKPLLDAMEVKEIADPRLEGKYDLVEMNRAMATASMCVHHMSSKRPYMNQVLKLLNGEEVAVEFSKKSMNPRSLLLDACDLEDYTCSNYLNDLNRHKELIME* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0038 473 ProSitePatterns Tyrosine protein kinases specific active-site signature. 279 291 IPR008266 GO:0004672|GO:0006468
Lan4g0038 473 SUPERFAMILY Protein kinase-like (PK-like) 143 428 IPR011009 -
Lan4g0038 473 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 473 - -
Lan4g0038 473 PANTHER OS08G0249100 PROTEIN 1 473 - -
Lan4g0038 473 Pfam Protein kinase domain 161 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0038 473 Gene3D Phosphorylase Kinase; domain 1 134 234 - -
Lan4g0038 473 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Lan4g0038 473 Gene3D Transferase(Phosphotransferase) domain 1 238 443 - -
Lan4g0038 473 ProSiteProfiles Protein kinase domain profile. 159 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0038 473 MobiDBLite consensus disorder prediction 46 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0038 Lan-Chr4 420904 424865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0038 147 422 Trihelix Transcription Factor Family AT1G68690 45.890 2.12e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan4g0038 Pkinase 9.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0038 - - gmx:100794225 681.019