Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0020 ATGGAAGTAGAATTCCAAGCATATACCAATGAATCTCAACAACAAAAATTTGTTCTTCCTGTGGATTCTGAGCACAAGGCCACTGAATTTCGATTGTTTTCGATTGCGAAACCGCATATGCGAGCATTTCATCTATCATGGGTGTCTTTCTTTTCATGTTTTGTGTCTAGTTTTGCAGCTCCACCACTTATACCTATAATTCGCGACAACCTCAATCTCACTGCTACTGACATTGGAAATGCTGGAGTTGCATCAGTCTCTGGTGCTGTTTTTGCTAGAATTGCAATGGGAACTGCTTGCGATTTAGTCGGTCCGCGCCTCGCCTCGGCCTCTCTTATACTCCTTACAGCACCAGCAGTTTACTTCACTTCCATAATTTCGTCGCCTACTTCGTTTCTCCTCGTTCGCTTCTTTACTGGCTTCTCTTTAGCGACTTTTGTCTCCACACAATTTTGGATGAGCTCTATGTTTTCTGCTCCTGTTGTTGGATCAGCAAATGGATTTTCAGGTGGATGGGGTAACCTTGGAGGAGGGGCTACCCAACTTATCATGCCTCTTGTGTTTTCGCTAATTCGCGATATCGGTGCTACAAAATTCACAGCATGGCGAATCGCGTTCTTTATTCCTGCATTTTTCCAAATGCTGACAGCATTTTCCATACTGATATTAGGCCAAGACATGCCAGACGGGAATTTTCATCGCCTAAAAAAGACGGGCGAAAAATCAAAAGACAAATTCTTAAGAGTCTTGTATCATGGTATTACGAATTATAGAGGGTGGATTCTAGCATTGACTTATGGATATTGTTTTGGAGTAGAATTAACTATAGATAACATTATCGCTGAATACTTCTACGACAGATTTAATCTCAAACTCCACACAGCCGGAATCATCGCGGCGAGTTTCGGCTTGGCTAACATATTTGCTAGGCCTACAGGAGGATTGATATCAGATGCAATGGGAAAGAGGTTTGGAATGAGGGGTAGACTTTGGGCCTTATGGCTTTGTCAAACATTGGGTGGAGTTTTTTGCATAATCCTTGGTTTGGTTGGTTCATTAACTGTTTCAGTTGTTGTTATGATCATATTTTCTGTGTTTGTCCAAGCTGCATGTGGAATGACATTTGGAGTTGTTCCTTTTGTTTCAAGAAGGTCATTAGGGGTGATATCTGGGATGACAGGAGGTGGAGGTAATGTAGGTGCAGTTGTGACACAATTAATTTTCTTCAAAGGATCAACATTCTCAAAAGAAAGAGGAATAACCCTAATGGGTGTTATGATCATAATATGCACATTACCATTATTCTCAATATATTTTCCACAATGGGGTGGCATGATTTTTGGTCCATCATCTAAGAAAGTGTCAGAAGAAGATTATTACTTAGGTGAGTGGAACTCAAAGGAGAAAGACAAAGGTTCTCATCATGCAAGTTTGAAATTTGCTGATAATTGTAGAAGTGAAAGAGGTAGAAAAGTTAACAATTTAACTATTCCTTCTGATGAAGTTACATCACCAAATATTTGA 1524 0.4016 MEVEFQAYTNESQQQKFVLPVDSEHKATEFRLFSIAKPHMRAFHLSWVSFFSCFVSSFAAPPLIPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTAPAVYFTSIISSPTSFLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGFSGGWGNLGGGATQLIMPLVFSLIRDIGATKFTAWRIAFFIPAFFQMLTAFSILILGQDMPDGNFHRLKKTGEKSKDKFLRVLYHGITNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANIFARPTGGLISDAMGKRFGMRGRLWALWLCQTLGGVFCIILGLVGSLTVSVVVMIIFSVFVQAACGMTFGVVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSTFSKERGITLMGVMIIICTLPLFSIYFPQWGGMIFGPSSKKVSEEDYYLGEWNSKEKDKGSHHASLKFADNCRSERGRKVNNLTIPSDEVTSPNI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0020 507 CDD MFS_NRT2_like 43 436 IPR044772 GO:0015112
Lan4g0020 507 Gene3D MFS general substrate transporter like domains 34 232 IPR036259 -
Lan4g0020 507 SUPERFAMILY MFS general substrate transporter 32 437 IPR036259 -
Lan4g0020 507 Pfam Major Facilitator Superfamily 48 403 IPR011701 GO:0022857|GO:0055085
Lan4g0020 507 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 1 493 - -
Lan4g0020 507 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 493 IPR044772 GO:0015112
Lan4g0020 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 436 IPR020846 GO:0022857
Lan4g0020 507 Gene3D MFS general substrate transporter like domains 245 442 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0020 Lan-Chr4 262050 264730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0020 15 494 Inorganic Solute Cotransporters AT1G12940 74.583 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0020 K02575 - gmx:100787888 855.514