Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1744 ATGATGAATAAGAATAAGGATCATGAGAAGAAGAAGAACAAGAAGCCTCGACTTACTTGGTCAGAAGAGTTGCACCGCAAATTTGTTAATGTTGTTAATCTTTTAGGAATTGAGAATGCTGTACCTAGAAAAATTCTTGCTTTCATGAATGATGAAAGGCTTACAAAGGAGAATGTGGCTAGTCATCTTCAGAAATACAAGCTTTCTCTCAAAAGAATTAGTAGCAGCTGTGTGCCGAATAAAAATGGTTCCATAATTGGTTGTGGACAATTTCAGAATGTTTCTCCAAGTGATCCTGTTTATCAGAACGATGCTGTTCAACAAAAGCCGATGTCAACATTGCATTCCGATGAAAGGCTTGATTCATTGGTCGATGATGTGTTATTGCAATGGTGGGAAGACAATAATCAGGATCCAACTGACCTATCAGATGTTATTGGTACCTTACTGAACACTCCTCCTTTGAAGGATGCTGTTAATAGTAATCTTGGTTCAACACAAGACTTGGTTACTCTCGCATCTTCGAGCTGCGTCTCGCACGAGTCAATCGAGATTGGAGAGCTGAGACAAGAGATTGCTGCAACCAGAAACGAGACTCGTCAATTGAGGGAGACGATCCATGCACTGAAGGCACAACAGGACATGTTGGTGCAAGTTGTTTTACAGCTTCTCCCACCCAATGTGTTAACGCAACAGTAG 699 0.4092 MMNKNKDHEKKKNKKPRLTWSEELHRKFVNVVNLLGIENAVPRKILAFMNDERLTKENVASHLQKYKLSLKRISSSCVPNKNGSIIGCGQFQNVSPSDPVYQNDAVQQKPMSTLHSDERLDSLVDDVLLQWWEDNNQDPTDLSDVIGTLLNTPPLKDAVNSNLGSTQDLVTLASSSCVSHESIEIGELRQEIAATRNETRQLRETIHALKAQQDMLVQVVLQLLPPNVLTQQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1744 232 Coils Coil 185 212 - -
Lan3g1744 232 SUPERFAMILY Homeodomain-like 14 72 IPR009057 -
Lan3g1744 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 174 - -
Lan3g1744 232 Pfam Myb-like DNA-binding domain 18 67 IPR001005 -
Lan3g1744 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 71 IPR017930 -
Lan3g1744 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 15 68 IPR006447 GO:0003677
Lan3g1744 232 Gene3D - 11 74 - -
Lan3g1744 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 174 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1744 Lan-Chr3 30031023 30033247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1744 6 73 G2-like Transcription Factor Family AT5G59570 60.294 6.25e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan3g1744 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1744 - K14491 lang:109344458 411.379