Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1743 ATGTCTATGGATCCAAAGAAATCTAACAAGACCAGAGAAATTGTTAGACTTCAACAGTTCCTTGAGAAATGGAGAAAACAAGCCAACTCTTCAAAAACCAACAACACCAACACCAACAACAACACAAGTAGTAAAAGCATCAAGTTTCTAAAAAGAACACTTTCTTTATCAGAACATGAAGAAGGAGTATCAAACAACAATGTTGTTCCAAAAGGGTACCTAGCTGTTTCTGTTGGTGAAAATCTTAAGAGATTCATTATTCCAAATGAGTATTTAACTCATCAAGCATTTCAGATACTTCTAAGAGAAGCAGAAGAAGAATTTGGGTTTCAACAAATTGGTGTTTTGAGGATTCCTTGTGAAGTATCAGTTTTTGAGAATATATTGAAGATTGTGGAGAGAAAGAAGAACAAGTTTTCTTCCACTCATGAATGTAGAATTAGGGTTGAAGAGATAATGGGATTTTGTTACTTAGAAAATCAACATGCTTATTCTTCTTCTCACCATTCTCAAAGTCCATTGTGTAGATAG 531 0.339 MSMDPKKSNKTREIVRLQQFLEKWRKQANSSKTNNTNTNNNTSSKSIKFLKRTLSLSEHEEGVSNNNVVPKGYLAVSVGENLKRFIIPNEYLTHQAFQILLREAEEEFGFQQIGVLRIPCEVSVFENILKIVERKKNKFSSTHECRIRVEEIMGFCYLENQHAYSSSHHSQSPLCR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1743 176 Pfam Auxin responsive protein 46 131 IPR003676 GO:0009733
Lan3g1743 176 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 176 IPR003676 GO:0009733
Lan3g1743 176 PANTHER OSJNBA0060N03.10 PROTEIN 7 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1743 Lan-Chr3 30006818 30007348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1743 3 176 Calmodulin-binding Proteins AT2G24400 52.973 7.09e-56 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0974 15 18999800 19000571 Lan3g1743 3 30006818 30007348 PCT
Lan3g1485 3 26352383 26353174 Lan3g1743 3 30006818 30007348 PCT