Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1727 ATGATGAATAAGAATAAGGATCATGAGAACAAGAACAAGAAGCCTCGACTTACTTGGTCAGAGGAGTTGCATCGCAAATTTGTTAATGTTGTTAATCTTTTAGGAATTGAGAATGCTGTACCTAGAAAAATTCTTGCTTTCATGAATGATGAAAGGCTTACAAAGGAGAATGTGGCTAGTCATCTTCAGAAATATAAAATTTCTCTCAAAAGAATTAGCAGCACCTGTATGCTAAATGAAAATGGTTCCATAATTGGTTGTGGACAATTTCAGAATGTTTCTCCAAGTGATCCTGTTTATCAGAACGATGCTGTTCAAGAAATGCCGATGCCAACATTGCATTCCGATGAAAGGCTTAATTCATTGGTCGAAGATGTGTTATTGCAATGGTGGGAAGACAATAATCAGGATCCAACTGACCTATCAGATGTTATTGGTACCTTACTGAACACTCCTCCTTTGAAGGATGCTGTTAATAGTAATCTTGCTCAAACACAAGACTTGGTTACTCTCACATCTTCGAGCTGCGTCTCGCACGAGTCAATCGAGATTGGAGAGCTGAGACAAGAGATTGCTGCAACCCGAAACGAGACTAATCAACTAAGGGAGACGATCCAAGCATTGAAGGCACAGCAGGACATGTTGGTACAAGTTGTTTTACAGCTTCTCCCACCCAATGCGTTAACGCAACAGTAG 696 0.4009 MMNKNKDHENKNKKPRLTWSEELHRKFVNVVNLLGIENAVPRKILAFMNDERLTKENVASHLQKYKISLKRISSTCMLNENGSIIGCGQFQNVSPSDPVYQNDAVQEMPMPTLHSDERLNSLVEDVLLQWWEDNNQDPTDLSDVIGTLLNTPPLKDAVNSNLAQTQDLVTLTSSSCVSHESIEIGELRQEIAATRNETNQLRETIQALKAQQDMLVQVVLQLLPPNALTQQ* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1727 231 Gene3D - 10 73 - -
Lan3g1727 231 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 67 IPR006447 GO:0003677
Lan3g1727 231 Coils Coil 184 211 - -
Lan3g1727 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 70 IPR017930 -
Lan3g1727 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 166 IPR045279 GO:0009736
Lan3g1727 231 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Lan3g1727 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 166 - -
Lan3g1727 231 Pfam Myb-like DNA-binding domain 17 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1727 Lan-Chr3 29804757 29806821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1727 12 72 G2-like Transcription Factor Family AT5G59570 62.295 1.34e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan3g1727 Myb_DNA-binding 2.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1727 - K14491 lang:109344458 401.364