Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1707 ATGACAAGCAAGAGGAAGAAGATGAAAATGTTTAGATGTGGTGATAATGACTATAATAAGGCAACATCAGAAGAGGTTGAAAGAGAACAAATGTCAACAGAAAATGTCAGCCAATACAGCCTCACCGCCATTGTACTTCCATCTCTTGGTGCCACCGCTGCCAATGGCGGCGACAGACACAAACTCCGCCGTTACGTTATCTCCCCATATAACCCTCGCTACAAACTATGGGAGAGTTTTCTGGTGTTATTAGTTTTCTACACTGCATGGGTGTGTCCATTTGAATTTGGGTTCCTTCAGAAAACATCAAGGGGTAAACTTGCTATAACAGACAATGTTGTGAATGGTTTTTTTGCCATTGATATTGTTCTTACATTCTTTGTTGCCTACTTGGATAAAGCTTCTTACGTTCTCGTTGACAATCAAAAGCTCATTGCTTTAAGATATGCTAAAACTTGGTTGCTCTTTGATATCATCTCTACTATCCCTTCTGAACTTGTTAGAAGTTTGGGTCCAAGTTTTCTCCACACATATGGATACTTCAATATTCTTCGCCTTTGGCGTCTTCGTAGAGTCAGTGCCATGTTTGCAAGATTAGAAAAGGACAGGAATTACAACTACTTCTGGGTCCGCTGTTCAAAGCTTACATGTGTTACTCTATTTTCAGTGCATTGTGCTGGCTGCTTTTTCTATTTCCTTGGGTCACAAGGTGACCCAAAACTTACATGGCTTGGGATTGTTGGTGAGGACTATAACAAGACTTTGTTGGGCCAATATTTAATTTCAATATATTGGTCGATAGTGACTCTTTCATCAGTTGGTTATGGTGATTTGCATCCTGTGAATACAAAAGAAATGACATTTGTTATTATCTATATGCTCTTCAATCTTGGACTTACTGCATATCTAATAGGAAACATGACCAACTTGGTTGTTCACTGGACAAATAAAACCAAGAGATATAGAGAAACTATCCAATCTGCCTCAAATTTCGCCCAAAGGAATCAATTACCAATCAGATTGCAAGAACAAATATATGCTCATTTGCTTATGAAGTACAGAACTGATTTAGAAGGATTGCAACAACAAGAGATCATTGAATCACTTCCAAAAGCAATCAAATGTAGTATCTCTTACTACTTATTCTACTCACTTGTTGAAAAAGTCTACTTATTTCATGGAGTCTCACGTGACCTTCTCTTTCAGCTGGTTACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATATAATTTTGCAGAATGAAGCACCAACAGACTTTTATATATTGGTTACTGGAGTTGTTGAAATTATCATAGAAAATAATGGAGTAGAACAGGTTGTTAGTGAAGCGAAGACAGGAGATGTAGTTGGAGAAATAGGAGTACTATGTTACAGGCCACAGCTTTTTACAGTTCGGACCAAGAGACTCACTCAACTTCTGCGTTTGAATCGAACTACATTTATATCTTTGTCTCGTTCAAATGTTGGAGATGGGACAATAATCATGAATAATTTTCTTCAGCATTTGCATGAAACAAAGGATCCATTGATGCAAGGAGTTGTGGAAGAAACAGAGGCGATGCTGGCTCGGGGCAAAACGGATTTGCCAGTGAGTTTATTGTTTGCATCAAATAGAGGAGATGATATATTGTTGCAACGCCTTCTTAAGAAAGGTTCAGATCCAAATGAAGCAGACAAGAATGGAAGGACAGCACTGCATATTGCAGCTTCTAAAGGTAGTAAGCATTGTGTTGTTCTGCTTCTAGAATATGGAGCTGATCCTAACACACAAGATTTTGATGGAAGTGTCCCACTTTGGGAAGCAATGATGGGAAGACATGAATCTGTCATGAAACTTCTTGCAGACAATGGTGCAGACATATCTTCAGCCAATGTAGGCCATTTTGCATGCATTGCTGTTGAGCAAAATAACTTAGAGTTGCTCAAGAACATTGTTCAATACGGCGGTGACGTAACGAGGTCCAAAAGCAATGGATCCACTGCACTCCATGCTGCAGTTTGCGAAGGCAATTTCGAAATAGTGAAGTTCCTTGTAGAAGAAGGAGCAGACATTGATAAACAAGACACTAATGGATGGACTCCAAGGGCTTATGCAGATCATCAATGCCATGAAGAAATACAAAATCTATTCCAAAACACTAGAGGACATAACAAAAATCCTTCTGATATTCCTCCAGCACCAAAGAATGATGGAGGACCCTTTTATGAAAGGTGGAAAAGTGACTCATCAATACCTGTAATATCCCAAGGAAGCATGCCATTACCTAATCAAGATTTAACATGGTCAGAAATGCATGGCAGGCGAAACGCTAATGCTTTTCAAAACTCCTTTTTCGGGATCATGTCAGCTGCAAATCGCGGTAACAAAAATCATGATGCATCTCAAAGAAATCACAATGCTACAATGAATATGAATGAATTACAATCCAGAGTAACACTTAGTTGTCCAGAGAAAGGTGAAAATGCTAAAAAGCTTGTTTTTGTGCCAAAGTCTCTTGAAGAACTGCTAGATATTGGTGCCAAAAAGTTTGATTTCTGTCCAACAAAAATTTTGAATAAAGAAGGAGCTGAAATTGAAGATATAAAGTTGATAAGAGATGGAGATCATGTTATTCTTGCATAG 2649 0.3858 MTSKRKKMKMFRCGDNDYNKATSEEVEREQMSTENVSQYSLTAIVLPSLGATAANGGDRHKLRRYVISPYNPRYKLWESFLVLLVFYTAWVCPFEFGFLQKTSRGKLAITDNVVNGFFAIDIVLTFFVAYLDKASYVLVDNQKLIALRYAKTWLLFDIISTIPSELVRSLGPSFLHTYGYFNILRLWRLRRVSAMFARLEKDRNYNYFWVRCSKLTCVTLFSVHCAGCFFYFLGSQGDPKLTWLGIVGEDYNKTLLGQYLISIYWSIVTLSSVGYGDLHPVNTKEMTFVIIYMLFNLGLTAYLIGNMTNLVVHWTNKTKRYRETIQSASNFAQRNQLPIRLQEQIYAHLLMKYRTDLEGLQQQEIIESLPKAIKCSISYYLFYSLVEKVYLFHGVSRDLLFQLVTEMKAEYFPPKEDIILQNEAPTDFYILVTGVVEIIIENNGVEQVVSEAKTGDVVGEIGVLCYRPQLFTVRTKRLTQLLRLNRTTFISLSRSNVGDGTIIMNNFLQHLHETKDPLMQGVVEETEAMLARGKTDLPVSLLFASNRGDDILLQRLLKKGSDPNEADKNGRTALHIAASKGSKHCVVLLLEYGADPNTQDFDGSVPLWEAMMGRHESVMKLLADNGADISSANVGHFACIAVEQNNLELLKNIVQYGGDVTRSKSNGSTALHAAVCEGNFEIVKFLVEEGADIDKQDTNGWTPRAYADHQCHEEIQNLFQNTRGHNKNPSDIPPAPKNDGGPFYERWKSDSSIPVISQGSMPLPNQDLTWSEMHGRRNANAFQNSFFGIMSAANRGNKNHDASQRNHNATMNMNELQSRVTLSCPEKGENAKKLVFVPKSLEELLDIGAKKFDFCPTKILNKEGAEIEDIKLIRDGDHVILA* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1707 882 ProSiteProfiles cAMP/cGMP binding motif profile. 391 492 IPR000595 -
Lan3g1707 882 SUPERFAMILY Ankyrin repeat 540 720 IPR036770 -
Lan3g1707 882 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 9 882 - -
Lan3g1707 882 Coils Coil 799 819 - -
Lan3g1707 882 Gene3D Jelly Rolls 357 516 IPR014710 -
Lan3g1707 882 Pfam Cyclic nucleotide-binding domain 411 495 IPR000595 -
Lan3g1707 882 PRINTS Ankyrin repeat signature 570 585 IPR002110 GO:0005515
Lan3g1707 882 PRINTS Ankyrin repeat signature 682 696 IPR002110 GO:0005515
Lan3g1707 882 Pfam Ion transport protein 75 318 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan3g1707 882 SUPERFAMILY cAMP-binding domain-like 316 511 IPR018490 -
Lan3g1707 882 ProSiteProfiles Ankyrin repeat region circular profile. 602 633 - -
Lan3g1707 882 ProSiteProfiles Ankyrin repeat profile. 666 698 IPR002110 GO:0005515
Lan3g1707 882 Pfam KHA, dimerisation domain of potassium ion channel 819 880 IPR021789 -
Lan3g1707 882 ProSiteProfiles KHA domain profile. 819 882 IPR021789 -
Lan3g1707 882 CDD CAP_ED 391 496 IPR000595 -
Lan3g1707 882 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Lan3g1707 882 PANTHER POTASSIUM CHANNEL AKT1 9 882 IPR045319 GO:0005249|GO:0006813
Lan3g1707 882 SMART cnmp_10 391 508 IPR000595 -
Lan3g1707 882 Gene3D - 75 312 - -
Lan3g1707 882 SUPERFAMILY Voltage-gated potassium channels 69 312 - -
Lan3g1707 882 ProSiteProfiles Ankyrin repeat region circular profile. 666 697 - -
Lan3g1707 882 ProSiteProfiles Ankyrin repeat region circular profile. 569 600 - -
Lan3g1707 882 SMART ANK_2a 633 662 IPR002110 GO:0005515
Lan3g1707 882 SMART ANK_2a 569 598 IPR002110 GO:0005515
Lan3g1707 882 SMART ANK_2a 536 565 IPR002110 GO:0005515
Lan3g1707 882 SMART ANK_2a 602 631 IPR002110 GO:0005515
Lan3g1707 882 SMART ANK_2a 666 695 IPR002110 GO:0005515
Lan3g1707 882 Gene3D - 538 721 IPR036770 -
Lan3g1707 882 ProSiteProfiles Ankyrin repeat profile. 569 601 IPR002110 GO:0005515
Lan3g1707 882 PRINTS EAG/ELK/ERG potassium channel family signature 87 94 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan3g1707 882 PRINTS EAG/ELK/ERG potassium channel family signature 111 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan3g1707 882 PRINTS EAG/ELK/ERG potassium channel family signature 122 131 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan3g1707 882 PRINTS EAG/ELK/ERG potassium channel family signature 259 276 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan3g1707 882 PRINTS EAG/ELK/ERG potassium channel family signature 285 296 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan3g1707 882 PRINTS EAG/ELK/ERG potassium channel family signature 303 312 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan3g1707 882 MobiDBLite consensus disorder prediction 721 746 - -
Lan3g1707 882 Pfam Ankyrin repeats (3 copies) 640 718 IPR002110 GO:0005515
Lan3g1707 882 Pfam Ankyrin repeats (3 copies) 542 631 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1707 Lan-Chr3 29605411 29609967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1707 19 882 Ion Channels AT2G25600 58.486 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1707 K21867 - gmx:100808832 1221.07