Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1695 ATGGGTCGTTGCCGAGCCACGTCTCGCCCTCCTCCTCCTCCTCCTGACGATGATCCCAACCTAAGAGCTAACTTAGCCAAGAGAAAAAGAGCTGGTTGGAATGTAGATATCTTAGACATTTCATCTACAGGCCAAGGAATACTAGCTGATGTGAAAGTATCTCTATACCACTGCAATTATTGCAACAAAGATGTTTCCGGGAAGATTCGCATTAAGTGCGTTGTGTGTCAAGATTTTGATCTCTGTGTAGAATGCTTCTCTGTTGGCGCCGAGGTGACACCTCACAAAAGCAGTCATCCGTATAGGGTTATGGACAATCTATCTTTTCCACTTCTATGTCCAGACTGGAATGCAGATGAAGAGATGTTACTTCTAGAGGGCATTGAAATGTATGGATCTGGGAATTGGAATGAAGTTGCCGAATATGTTGGAACAAAAAGCAAATCTCAATGTATTGACCACTATAATGCTGTATATATGAATTCACCATGCTTTCCTCTCCCGGATATGTCTCATGTTATGGGAAAGAGCAGAGAGGAACTCCTTGCCTCGGCGAAGGGACGTGAAGTCAAGAAAGAATTTCCTCCGTCTGCAGAGCTTACTCTGAAAGAAGAACCTCCCTTCTCTGAAGGAATAAACTCTGAAGAATCTAAGATGGTAGAAACCACTAATCAAACAATGTCTAAATTAAGCTCAGTATGCAGCAAAACTTACTCAAGTACAATTAAGAAGGCTTCCAACATAAGCCAGAATAATGACGGAGTTAAGGTGGAAGTAGAACCTCAAGTGGATCGGAGCATCGGAGAGAAGAAACCTAAATTATCCGCGGAAGATAGACCTTCTATGACAGAGTTGAGTGGATATAATTTTAAGAGAGAGGAATTTGATATAGAATATGACAACGATGCAGAGCAAACATTGGCGGAAATGGAATTTAAGGATACTGATACTGACAGTGAACGGGAAGTGAAACTGCAGGTGCTCCGTATCTACTTAAAAAGGTTAAATGAGCGAAAGCGCAGAAAGGATTTTGTACTTGAAAGAAATTTTCTTTCTCCGGATCCTTTTGAGAAATCTCTTTCAGCTGAAGAGCTTGAAATATGTCAGCACTACAAGGTCTTCATGCGGTTTCATTCAAAAGAAGAGCATAAGGAGTTGCTAAAAAATATTATTGAAGAACACCGACTTGTCAAAAGAATAAAAGATTTACAGGAAGCTCGTACTGCTGGTTGTCGAACTGCTGCCGAAGCCTATCAATTTGTTGAAGATAAGAGAACAAAGGTAGCTGAACAGAGTGCCAGTAAAGAAAGTGGTCAGATCGGTACAACCACCAAGATTTTAGGGAGACCAAATTCTCTCAAAGGCGACATTGATAGCAGCCCACAGGGACTTGTGAAGGGGACTACCGGTCCGTTTTCCGGTGTCAAGGATTCACCTGCTATACAAGCTATCTCAAATTCCCTAGAAGAATGGGATATAAGTGATTTTACAGGAGCTGAATTACTATCTGAATCTGAGAAAAAGCTTTGTAATGAGATCAGAATTCTACCATCACACTATCTCAACATGCTTCAGATCATGTCATTAGAAATTTCAAAGGGCAATGTAACAAAGAAATCTGATGCACATAAACTTTTCAAGGTAGACCCAAGCAAAGTTGATAGAGTCTATGATATGCTTCTTTCAAAGGGTCTTTTTTAA 1701 0.4068 MGRCRATSRPPPPPPDDDPNLRANLAKRKRAGWNVDILDISSTGQGILADVKVSLYHCNYCNKDVSGKIRIKCVVCQDFDLCVECFSVGAEVTPHKSSHPYRVMDNLSFPLLCPDWNADEEMLLLEGIEMYGSGNWNEVAEYVGTKSKSQCIDHYNAVYMNSPCFPLPDMSHVMGKSREELLASAKGREVKKEFPPSAELTLKEEPPFSEGINSEESKMVETTNQTMSKLSSVCSKTYSSTIKKASNISQNNDGVKVEVEPQVDRSIGEKKPKLSAEDRPSMTELSGYNFKREEFDIEYDNDAEQTLAEMEFKDTDTDSEREVKLQVLRIYLKRLNERKRRKDFVLERNFLSPDPFEKSLSAEELEICQHYKVFMRFHSKEEHKELLKNIIEEHRLVKRIKDLQEARTAGCRTAAEAYQFVEDKRTKVAEQSASKESGQIGTTTKILGRPNSLKGDIDSSPQGLVKGTTGPFSGVKDSPAIQAISNSLEEWDISDFTGAELLSESEKKLCNEIRILPSHYLNMLQIMSLEISKGNVTKKSDAHKLFKVDPSKVDRVYDMLLSKGLF* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1695 566 CDD SANT 116 156 IPR001005 -
Lan3g1695 566 MobiDBLite consensus disorder prediction 430 461 - -
Lan3g1695 566 Gene3D - 114 163 - -
Lan3g1695 566 ProSiteProfiles Myb-like domain profile. 116 159 IPR001005 -
Lan3g1695 566 SUPERFAMILY Homeodomain-like 484 566 IPR009057 -
Lan3g1695 566 Gene3D - 49 104 IPR043145 -
Lan3g1695 566 ProSiteProfiles SWIRM domain profile. 482 566 IPR007526 GO:0005515
Lan3g1695 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 163 IPR017930 -
Lan3g1695 566 Gene3D - 483 566 IPR036388 -
Lan3g1695 566 ProSiteProfiles SANT domain profile. 111 163 IPR017884 -
Lan3g1695 566 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 17 565 - -
Lan3g1695 566 SMART zz_5 52 97 IPR000433 GO:0008270
Lan3g1695 566 CDD ZZ_ADA2 56 104 IPR041983 -
Lan3g1695 566 Pfam Myb-like DNA-binding domain 115 156 IPR001005 -
Lan3g1695 566 ProSitePatterns Zinc finger ZZ-type signature. 58 85 IPR000433 GO:0008270
Lan3g1695 566 ProSiteProfiles Zinc finger ZZ-type profile. 53 109 IPR000433 GO:0008270
Lan3g1695 566 MobiDBLite consensus disorder prediction 432 461 - -
Lan3g1695 566 SUPERFAMILY RING/U-box 55 119 - -
Lan3g1695 566 SMART sant 112 161 IPR001005 -
Lan3g1695 566 Pfam Zinc finger, ZZ type 56 96 IPR000433 GO:0008270
Lan3g1695 566 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 17 565 IPR034318 GO:0003713|GO:0006357|GO:0035065
Lan3g1695 566 SUPERFAMILY Homeodomain-like 109 162 IPR009057 -
Lan3g1695 566 PIRSF Txn_adaptor_ADA2 47 566 IPR016827 GO:0003713|GO:0006357|GO:0035065
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1695 Lan-Chr3 29394666 29411292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1695 1 565 EF-hand Containing Proteins AT3G07740 53.819 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan3g1695 Myb_DNA-binding 3.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1695 K11314 - gmx:100779424 862.833