Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1692 ATGATGGAGAGCGTAGTTGTTATTGAAGAAGCTGCTGAAGTAACAGATTTACCTCCGCTACCTGGTATTGAAAAAGCTGCTGAGCTACCACCTTTACTTCCACTACCTCCTGATGTGCCACCCAAATTTGATACAGAACAAGTGGCTCCTACTGTGTATTCTGTTATCAGTCGGCAAGGGGTTGGGACCGTAGGAAAACGCATACCACTGCTTGCCAATCACTTCAAAGTTGCTGTTAATGTTCCGGATGCAACATTTTTCCAGTATAATGTTACTGTTACTTCGGAAGATAAAATAAGTATTGAAAGCAAGGGCATCAGGAGAAAACTGATAAATAGGCTGTCCCAAACATACTCTTCTGAACTTGGTGGCAAAAGTTTTGCATACGATGGAGAGAGGACTTTGTGTACAGTGGGTTCTCTGCCACTTGATAAGTTTGAGTTCAAAGTATTGCTTGAGGAGTCATATGCAAAGCACAGTAGTACTGAGAATCCTGGTGCTAATGGAAAGCCGCACGAGGAAACTAAAAGATCAAAACGCTCTTTTCAATCAAAGACATTCATTGTGGAGATAAGTTTTGCTGCCAAAATACCCCTTCAGTCCATTGCTCTTGCCCTCGATGGGGTTGAGTCAGATACTAATTCTCAGGATGCTTTGAGAGTGCTTAATATTGTACTGAGGCAGCAAGCAGCTAACAGAGGGTGTCTCTTGGTACGTCAATCATTTTTTCATGACGACTCAAGGAATTTCAATGATGTTGGAGGTGGAGTAACAGGAGTTCGCGGTTTTCATTCCAGTTTTCATCTCACACAGGCTGGATTGGCTCTCAATATGGATACGTCCACAACGATGATCTTAAAGCCTGGACCTGTAATTGATTTTCTCCTATCAAACCAGAATGTGAGGGAACCCCGTAATATTGACTGGGCAAAGGCCAAAAAAATGCTTAAAAATTTAAGAGTGCGTGCAACACATAGTCACCAGGAATTTAAAATCTCTGGCTTGAGTGGGAAACCCTGCATTCAGCAACTTTTTAGTATGAAGTTGAGAAACGTTGATAACAGTAATGGAGTTCAGACAGTGGATATTACTGTATTTGAGTATTTTGCTAAACACTGTGGCATACAGCTTACCTCATCTGCTTATCTTCCCTGTCTTGATGTTGGGAAACCAAACCGGCCTATCTATCTGCCTCTGGAGTTATGCTCACTTGTTTCCCTCCAACGGTATACAAAGGAATTATCTCCAATGCAGAGAGCATCATTAGTAGAAAAATCGCGCCAGAAGCCTCAAGAGAGAGTTAAAATTGTAACAAATGCTGTAGGAGATTATTGCTATGATGATGACCCTGTTCTTGCTGCTTGTGGCATTTCTATCGAGAGGAAAATGACCGAGGTTGAAGGTCGAGTTCTTGAGACACCAAAGTTGAAGGTCGGTAATAATGGTGAGTGCGTTCCCCAAAATGGAAGGTGGAGCTTTACTAAAAAGGCACTTCTACAACCGTCTCAAATTGATTACTGGGCTGTTGTCAACTTCTCTGCAAAATGTGATACTAGTTACATATCAAGGGAGCTGATCCGATGTGGAATGAGCAAGGGCATTAACATCGAACGACCGTATACTTTAATTGAGGAAGATCCACAGTTGAGAAGATCTGACCCTGTTACAAGGGTTGAAAATATGTTTGAGCTTCTTATATCAAAACTTACAAAAGAACCAAAGCTAATTCTGTGTGTGTTGCCAGAAAGGAAAAATTGTGACATTTATGGGCCATGGAAGAAGAAGTGTCTCAGTGAATTTGGTGTTGTCACACAGTGCATTTGCCCTGTTAAGATCACTGACCAATACCTTAATAATGTACTTCTCAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGCTGGCAATTGAGCATTCTGGGCATCTTCCTCTGGTTAAAGATACCCCGACAATGATTTTGGGGATGGATGTCTCTCATGGTTCCCCTGGTCGGTCAGATATACCATCAATAGCAGCAGTTGTTGGATCTCGATGTTGGCCACTTATTTCAAGGTATAGAGCATCTGCAAGAACACAGTCATCTAAGGTGGAGATTATTGATTCTCTGTACAAGCCTTTGGATAATGGGAATGATGATGGTATTGTCAGAGAGTTGTTTCTAGATTTCTATGAATCAAGTCAACGTCGCAAACCAACTCAAATCATTGTCTTCAGGGATGGAGTCAGTGAATCACAATTTAATCAGGTTTTGAATATTGAGCTTAACCAGATAATAAAGGCCTATCAACATTTAGGGGAAGTCGATGTTCCCAAGTTCACTGTAATCGTGGCACAGAAAAATCACCATACAAAGCTGTTTCAAGCTAATGGTCTGGAAAATGTTCCTCCTGGGACAGTTGTCGATACAAAAGTCACGCATCCGAGAAATTATGATTTTTACATGTCTGCTCATGCTGGGATGTTTGGAACAACTAGGCCTGTGCATTATCATGTGTTGCTCGATGAAATTGGTTTCTCGGCCGATAGCTTGCAAAATTTGATCCATTCGCTGTCTTATGTGAACCAAAGGAGCACAAATGCAACCTCAGTTGTGGCGCCTATACACTATGCCCACCATGCTGCAGCTCAGATGGGTAGATTTTTGAATTTTGATGATTTATCAGAAGCCTCAAGTGTTACTTCAGAGGGAAATGTCCCCATCCCAGAGCTTCCAAGGTTGCATAGTAATGTCAAAAGTACCATGTTCTTCTGTTGA 2757 0.4153 MMESVVVIEEAAEVTDLPPLPGIEKAAELPPLLPLPPDVPPKFDTEQVAPTVYSVISRQGVGTVGKRIPLLANHFKVAVNVPDATFFQYNVTVTSEDKISIESKGIRRKLINRLSQTYSSELGGKSFAYDGERTLCTVGSLPLDKFEFKVLLEESYAKHSSTENPGANGKPHEETKRSKRSFQSKTFIVEISFAAKIPLQSIALALDGVESDTNSQDALRVLNIVLRQQAANRGCLLVRQSFFHDDSRNFNDVGGGVTGVRGFHSSFHLTQAGLALNMDTSTTMILKPGPVIDFLLSNQNVREPRNIDWAKAKKMLKNLRVRATHSHQEFKISGLSGKPCIQQLFSMKLRNVDNSNGVQTVDITVFEYFAKHCGIQLTSSAYLPCLDVGKPNRPIYLPLELCSLVSLQRYTKELSPMQRASLVEKSRQKPQERVKIVTNAVGDYCYDDDPVLAACGISIERKMTEVEGRVLETPKLKVGNNGECVPQNGRWSFTKKALLQPSQIDYWAVVNFSAKCDTSYISRELIRCGMSKGINIERPYTLIEEDPQLRRSDPVTRVENMFELLISKLTKEPKLILCVLPERKNCDIYGPWKKKCLSEFGVVTQCICPVKITDQYLNNVLLKINSKLGGINSLLAIEHSGHLPLVKDTPTMILGMDVSHGSPGRSDIPSIAAVVGSRCWPLISRYRASARTQSSKVEIIDSLYKPLDNGNDDGIVRELFLDFYESSQRRKPTQIIVFRDGVSESQFNQVLNIELNQIIKAYQHLGEVDVPKFTVIVAQKNHHTKLFQANGLENVPPGTVVDTKVTHPRNYDFYMSAHAGMFGTTRPVHYHVLLDEIGFSADSLQNLIHSLSYVNQRSTNATSVVAPIHYAHHAAAQMGRFLNFDDLSEASSVTSEGNVPIPELPRLHSNVKSTMFFC* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1692 918 MobiDBLite consensus disorder prediction 159 179 - -
Lan3g1692 918 SUPERFAMILY PAZ domain 283 443 IPR036085 GO:0005515
Lan3g1692 918 Gene3D paz domain 282 410 - -
Lan3g1692 918 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 49 917 - -
Lan3g1692 918 Pfam PAZ domain 292 422 IPR003100 GO:0005515
Lan3g1692 918 Pfam Piwi domain 575 882 IPR003165 GO:0003676
Lan3g1692 918 SUPERFAMILY Ribonuclease H-like 567 881 IPR012337 -
Lan3g1692 918 SMART Piwi_a_2 575 883 IPR003165 GO:0003676
Lan3g1692 918 Pfam N-terminal domain of argonaute 66 226 IPR032474 -
Lan3g1692 918 ProSiteProfiles Piwi domain profile. 575 883 IPR003165 GO:0003676
Lan3g1692 918 CDD PAZ_argonaute_like 288 405 - -
Lan3g1692 918 Gene3D - 470 636 - -
Lan3g1692 918 Gene3D - 642 918 IPR036397 GO:0003676
Lan3g1692 918 SMART DUF1785_2 236 288 IPR014811 -
Lan3g1692 918 CDD Piwi_ago-like 450 877 IPR045246 -
Lan3g1692 918 ProSiteProfiles PAZ domain profile. 313 406 IPR003100 GO:0005515
Lan3g1692 918 Pfam Argonaute linker 1 domain 238 285 IPR014811 -
Lan3g1692 918 Pfam Argonaute linker 2 domain 432 477 IPR032472 -
Lan3g1692 918 PANTHER PROTEIN ARGONAUTE 6 49 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1692 Lan-Chr3 29367228 29378911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1692 58 918 Eukaryotic Initiation Factors Gene Family AT5G43810 35.366 1.06e-160 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1692 K11593 - gmx:100778875 1424.07