Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1691 ATGAGTCATGAACGAAGCTTTTCTGTTAACCGCTCCGATTATGAGCTTCTTGAAGAAGTTGGTTACGGCGCCACCGCCACCGTTTATAGAGCTAACTTTCTTCCTCTCAATCAACTCGTTGCTATTAAGTCCTTGGATCTCGAACGATGCACTCTTAATCTGGATGATATACGAAGAGAGACTCAAACGATGAGTTTGATTGACCATCCTAATGTTGTGAGAGCATTTTGTTCTTTCACGGTGGATCATAGCCTTTGGGTGGTGATGCCATTCATGAATGAGGGTTCTTGTTTGCACCTCATGAAGTCAGCCTATCCTGATGGATTTGAAGAGGACGCGATTGGATCTATACTCAAAGAGACTCTCAAGGCTTTGGAGTATCTTCACCAACAAGGCCATATACATCGAGATGTTAAGGCTGGGAACATTTTACTTGATAGCAGTGGCACTGTAAAGCTTGGTGACTTCGGTGTTTCCACTTGCATGTTTGATAGTGGTGATAGACAGCGATCGAGAAATACGTTTGTGGGGACTCCTTGCTGGATGGCTCCAGAGGTACTGCAACCAGGAAGTGGTTATAATTCCAAGGCTGATATTTGGTCTTTTGGAATTACTGCTCTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACCATACAGAACGCCCCTCCTGGACTTGATTACGACCGTGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACAAAGAGACCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAGAATGCGAAACCTCCCGAGCTTTCTGTGAAGAAATTGTTCGCTGACTTACCACCTCTTTGGAATCGTGTAAAATCCCTCCAGCTTAACGACTTAGCTCAATTAGCACTGAAGAGAATGCCTTCTTCAGAACAAGAAGCAATATCTCAGAGTGAATACCACCGAGGAGTTAGTGCGTGGAACTTTGATGTTGATGATTTGAAAGCTCAAGCTTCGTTGTTGCGGGATGAGGATGATATTGTAGACATAAGGGAAGAAGAATACAAGGATGTAACTGATTCCCAGTCTAGTGCTGGCAAAGAGAACACCAAGAACTCACCAAAGGATGATATCACTTCATATGTAGATGGTAGTGACACAAAACATATTGAGCAGAGTGAATATGCGAACAAAAAGAAGATTCTTGAAAGTGATCTGAGAGAACCTGGATTGCCCAATAATTTTATTTGGAATAGAAATGGTTCAATAGCAGAGGCAACATCTACTATAGAGAAGGATGCTAGTTTGAGCAAGATTAAAACTCAATCTGCGAAAAATCGTGAAACCCAAAGCGGGCCATTGGTGCCAGGCGCAGTCCTCAGTCGTTCTTCAACAGACAGAGGACGTACATTTGAAAGTACTTCCAGGCTTGAGAATGGGAATCAATTACCAAGTGAGAAAAATATTCATCAAGTGCGACGAGCTCCAAGTTTTAGTGGCCCATTGATGCTCCCAACACGAGCTTCAGCAAATAGTTTATCGGCTCCAATAAAGCCCTCTGGAGGTTTCAGAGATTCCATGGATGACAAGTTTAAGGCTAATCTAGTGCAAATTAAAGGGAGATTCTCCGTGACATCAGAAAATTTAGATCTTGTGAAGGATATTCCTTTATGTTCAGTGTCACACCGATCTTCACAGGGATCGACAATTCGTAAATCTGCTAGTGTTTGTGATTGGATGTCAGATTCTAAACAAATGATTGGTCAGGCCCCCACAAGTACTGCCACTACCAACATCTCTGGATCACTTCTTGTGCCTCACCTTCAAAATCTTTTCCAGCAGACATCTATTCAACAGGACCTTATAATGAATTTGTTGAATAGCTTGCAACAAGATGAAGCAAATGATGTTTCACAGAATGGAAGGTTGCCACCATTACCTAATGGTTCAGAGGACAATGGAAGTGTTGAGACAACTGCTACAGAGAGGGAACGTGTTCTTCTGGCCAAAGTTTCAGAACTTGAGGCTCGGATGATCAATTTGACGGAAGAACTGGATGCTGAGAAATTGAAAACCATTCAGTTGCAACAACAACTGAACAGTGGGGAACAAAATGGGGACATAGCAGAGGAAATTGCATGA 2166 0.4234 MSHERSFSVNRSDYELLEEVGYGATATVYRANFLPLNQLVAIKSLDLERCTLNLDDIRRETQTMSLIDHPNVVRAFCSFTVDHSLWVVMPFMNEGSCLHLMKSAYPDGFEEDAIGSILKETLKALEYLHQQGHIHRDVKAGNILLDSSGTVKLGDFGVSTCMFDSGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKSLQLNDLAQLALKRMPSSEQEAISQSEYHRGVSAWNFDVDDLKAQASLLRDEDDIVDIREEEYKDVTDSQSSAGKENTKNSPKDDITSYVDGSDTKHIEQSEYANKKKILESDLREPGLPNNFIWNRNGSIAEATSTIEKDASLSKIKTQSAKNRETQSGPLVPGAVLSRSSTDRGRTFESTSRLENGNQLPSEKNIHQVRRAPSFSGPLMLPTRASANSLSAPIKPSGGFRDSMDDKFKANLVQIKGRFSVTSENLDLVKDIPLCSVSHRSSQGSTIRKSASVCDWMSDSKQMIGQAPTSTATTNISGSLLVPHLQNLFQQTSIQQDLIMNLLNSLQQDEANDVSQNGRLPPLPNGSEDNGSVETTATERERVLLAKVSELEARMINLTEELDAEKLKTIQLQQQLNSGEQNGDIAEEIA* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1691 721 MobiDBLite consensus disorder prediction 471 490 - -
Lan3g1691 721 MobiDBLite consensus disorder prediction 448 490 - -
Lan3g1691 721 ProSiteProfiles Protein kinase domain profile. 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1691 721 SMART serkin_6 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1691 721 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 710 - -
Lan3g1691 721 Coils Coil 672 706 - -
Lan3g1691 721 Gene3D Transferase(Phosphotransferase) domain 1 95 320 - -
Lan3g1691 721 CDD STKc_OSR1_SPAK 12 275 - -
Lan3g1691 721 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Lan3g1691 721 MobiDBLite consensus disorder prediction 370 388 - -
Lan3g1691 721 MobiDBLite consensus disorder prediction 642 670 - -
Lan3g1691 721 MobiDBLite consensus disorder prediction 362 394 - -
Lan3g1691 721 Pfam Protein kinase domain 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1691 721 MobiDBLite consensus disorder prediction 642 664 - -
Lan3g1691 721 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 710 - -
Lan3g1691 721 SUPERFAMILY Protein kinase-like (PK-like) 11 330 IPR011009 -
Lan3g1691 721 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1691 Lan-Chr3 29347299 29362827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1691 7 709 MAP Kinase Kinase Kinase Kinase AT4G10730 65.021 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lan3g1691 Pkinase 2.6e-59 CL0016