Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1690 ATGAATTCCGATTCCAATGATAATGATGTTGTTGAGAAAGATCCAAGTTCGCGATATTTACGATATGATGAGATTTTGGGGAAAGGAGCATTCAAGACTGTATATAGGGCATTTGATGAAATAAATGGAATCGAGGTTGCGTGGAATCATGTTAGTATCGAGGATGTTTTGCAGTCATCGCAGCAGTTGGAAAGATTATATTCTGAGATTCATCTTCTCAAGACATTGAAGCATGAAAATATCATTAAGCTCCATAATTCTTGGGTGGATGATAAGAACAAGACGATCACCATGATTACCGAGTTATTCACCTCAGGGAGTTTGAGGCAGTATCGGAAGAAACATAAGAATGTTGATATGAAAGCCATCAAGAATTGGGCAAGGCAGATTCTTCGAGGCTTATGCTATCTGCATAGTCATAGTCCTCCAATAATTCACAGGGATCTTAAATGTGATAATATTTTTGTTAACGGCAATAATGGACATGTTAAGATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAACCTACTGCCCGGAGTGTTATAGGTACACCAGAGTTCATGGCCCCAGAGCTATATGATGAAGAATATAATGAACTTGTTGATATATATTCATTTGGCATGTGTATGTTGGAAATGATCACCTGTGAGTTCCCATACAGTGAATGTAAAAATCAGGCCCAGATATATAAGAAAGTTACATCTGGTGTAAAGCCTGCTGCTCTTGCCACAGTAAATGATCCGGAAGTGAAGCGGTTTATTGAGAAGTGTCTAGTTCCAGCTTCTATGAGGTTGCCTGCATCTGAACTACTGAAAGACCCATTCCTTGCAACTGAAAACGCAAAGGAGATCGATCGTGATTTACCGAAGCTGCCTAATCTACCCATCAAATTGGTAAATCGACCAATATCGGAGCCTCATCCCATGGAGATAGACTCGAATGTCAAGCATACTTCAACTGGCTCTGCTGTTAGAACAATTGAAGAAGCCTCTCAAGTTTTAACGTTTGATCTCGTCAGGATGACTGAGAATAATGAATTTAGATTAAGAGGAGATAAAGATGGTGAAAGAACAATTTCGCTTATGCTGAGAATTGCTGATGCACATGGTGAAGCAAGGAATATCCATTTTCCGTTCTTCATCAATTCGGATACAGCAATTTCAATTGCTGCGGAGATGGTAGAACATCTGGAACTCGCAAGTGAGGATGTAGCTGTCATTGCTGAGCTAATACACGACATGATTGTGAAGCTTGTGCCAAACTGGCAACCCTCAAGTCAGGACCTTCAATTTCGAACAGATCACTCATGCAAGTCTCCCGATGTTCAGAATGGTGAAATAGGAAGTTGCCATTGGCCACCACTATCAAGTGATTTCAATAAGAACGAAGTCGGTGGGGATTTTGTTCTTTCAAAACATATTGATGTGGCAGATCAGGAGAAGCAAGAATCTGTTACGTCAGATATTTCAGTAGAGTATGGGGTTCAAGCCGCCTCATATTCTATAGAGCATGATTTTTCGATTCTTGCCGATTGCTGCAAAGGATCCAATGGCTTCAATTGCAATTCAGATTTCATGTTTTGTGGTCAAGAAGATGATGGACACAAGAACAAAACTAACCAATCAGAGAATCACTCAACAAGCTCTATGATGAATTCATGTTGCAGCGCATCCGAAATATTTGACGTGTCAAGCATCTGTTCTCTAACTCTAGCCGATAAAGATCATTCCAGCAACGAGCTGCAGTTGGAGCTCGATGAAATAGATTTACAGTATCAGCAATGCTTTCATCAGCTTGAGAAAATGAGGCAGGAGGCCATAGAAAATGTCAAAAGGAAATGGATAACAAATGAAGAAAATATAAAGCCATATATGATGCATTAG 1887 0.4001 MNSDSNDNDVVEKDPSSRYLRYDEILGKGAFKTVYRAFDEINGIEVAWNHVSIEDVLQSSQQLERLYSEIHLLKTLKHENIIKLHNSWVDDKNKTITMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCYLHSHSPPIIHRDLKCDNIFVNGNNGHVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEFPYSECKNQAQIYKKVTSGVKPAALATVNDPEVKRFIEKCLVPASMRLPASELLKDPFLATENAKEIDRDLPKLPNLPIKLVNRPISEPHPMEIDSNVKHTSTGSAVRTIEEASQVLTFDLVRMTENNEFRLRGDKDGERTISLMLRIADAHGEARNIHFPFFINSDTAISIAAEMVEHLELASEDVAVIAELIHDMIVKLVPNWQPSSQDLQFRTDHSCKSPDVQNGEIGSCHWPPLSSDFNKNEVGGDFVLSKHIDVADQEKQESVTSDISVEYGVQAASYSIEHDFSILADCCKGSNGFNCNSDFMFCGQEDDGHKNKTNQSENHSTSSMMNSCCSASEIFDVSSICSLTLADKDHSSNELQLELDEIDLQYQQCFHQLEKMRQEAIENVKRKWITNEENIKPYMMH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1690 628 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1690 628 Gene3D - 358 448 - -
Lan3g1690 628 PANTHER WNK KINASE 1 619 - -
Lan3g1690 628 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 360 416 IPR024678 GO:0004674|GO:0005524
Lan3g1690 628 Gene3D Transferase(Phosphotransferase) domain 1 103 285 - -
Lan3g1690 628 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1690 628 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1690 628 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Lan3g1690 628 Coils Coil 586 606 - -
Lan3g1690 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lan3g1690 628 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 619 - -
Lan3g1690 628 CDD STKc_WNK 18 277 - -
Lan3g1690 628 SUPERFAMILY Protein kinase-like (PK-like) 22 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1690 Lan-Chr3 29341518 29344959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1690 9 620 MAP Kinase Kinase Kinase AT5G41990 52.451 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan3g1690 Pkinase 3.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1690 K08867 - gmx:100783717 829.706