Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1682 ATGGAGTCACCAGTTGATAGAGTTGAGAATTCAGTTTCTGGGGTAGATCAGTATATTCCTTCCACATCGGGGATGAAGCCCGTCATCCAGCATCAAAATGGCTATGTAGTTAGTGGCAAATCGGAGTACGTGAGCCTCAATAAAACTGTTCAAACGAAACATCGCATCAATCAACCATCTGAAGATTCCAAGAATTGTGAAATAGAATCTGACAATGGCGTGTTAGGTTCGTCGAAAGGAGTTAATGATCGAACAAAAAGCTGCTATCAGTCGGAGATTATTTGTAGTCCAAGTCCTCCGAACAGTTTCTATTCTGCCACTGTCTATTCAGAAGCCAAACAAAGTTTCACAAATACTGTAGCAAGTGAGTATGTTACGGTTGATAAGTCGGTTGAAAGTGGAGAAGTTACTAATTCGTGTGACTTCAACAATGAGAGCAGCGTCTGTAGAGGGAGTACCGGAAGTGACGTCAGTGACGAGAGCAGCACGAGTAGTTTCAGCAATGCTATGTATAAACCTCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCCATCCGAGTTCGTGACGGGATGATGGAAATGAGACATTTTAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTTTATCTAGCAGAGTTAAATGGCACAAGGACTTGTTTCGCTATGAAAGTAATGAACAAAACCGAGCTCGCGAGTCGCAAGAAACTTGTGAGGGCTCAAACTGAGAGAGAGATATTGCAGTCTCTGGATCATCCGTTTCTGCCGACATTATACACACACTTTGAGACAGACACATTCTCCTGCTTGGTCATGGAGGTTTGCCCCGGTGGGGACCTTCATGCACTCAGGCAAAGACAACCTGGGAAATATTTTTCTGAACATGCTGCCAGGTTTTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTCGGGATCATCTACAGAGACCTTAAGCCGGAGAATGTATTGGTGAGAGAAGATGGTCATATTATGCTGTCAGATTTTGATCTCTCTCTAAGATGTGTTGTTAGTCCTACAATGGTGAAGTCGTCACACGCTTTTATGGAGACAAAAAGCTCGGGAGGATACTGCATTCGGCCTGCTTGCATTGAACCAACTTGTGTAATCCAGCCCGACTGCATCAAACCTTCATGTTTCACACCGCGCTTTCTATCGAGCAAATCGAAGAAGAAAGAAAAAAAGTCGAAACCTCAGAATGATATGCATAATCAAGTGATTCCTCTCCCCGAGCTTCTTGCCGAGCCTACAAATGCGCGATCGATGTCCTTTGTAGGCACACATGAGTACTTGGCACCTGAGATAATCAAAGGTGAAGGGCATGGCAGTGCTGTAGATTGGTGGACATTTGGGATATTCTTATACGAGCTTTTATTCGGTCGAACGCCATTCAAAGGTTCGGCTAATAGAGCGACTCTATTTAACGTGGTTGGCCAGCCCTTAAGGTTTCCGGAATCCCCTACAGTCAGTTTTGCTGCAAGGGACTTGATCAGAGGCTTACTCGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGCGGCGCCACGGAGATAAAACAACACCCGTTCTTTCAAAACGTGAACTGGGCGTTGATCCGTTGCGCGAATCCGCCCGAGGTGCCGAGACAGGCCATGAAAACAGCAGCACTCACAGCTGAAAAGGTTCCTCCTGGTGTGAACCCTTGTGGTGATTATTTAGATATTGATTTCTTTTGA 1758 0.4505 MESPVDRVENSVSGVDQYIPSTSGMKPVIQHQNGYVVSGKSEYVSLNKTVQTKHRINQPSEDSKNCEIESDNGVLGSSKGVNDRTKSCYQSEIICSPSPPNSFYSATVYSEAKQSFTNTVASEYVTVDKSVESGEVTNSCDFNNESSVCRGSTGSDVSDESSTSSFSNAMYKPHKANDIRWEAIQAIRVRDGMMEMRHFRLLKKLGCGDIGSVYLAELNGTRTCFAMKVMNKTELASRKKLVRAQTEREILQSLDHPFLPTLYTHFETDTFSCLVMEVCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTMVKSSHAFMETKSSGGYCIRPACIEPTCVIQPDCIKPSCFTPRFLSSKSKKKEKKSKPQNDMHNQVIPLPELLAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRQAMKTAALTAEKVPPGVNPCGDYLDIDFF* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1682 585 Gene3D Transferase(Phosphotransferase) domain 1 283 351 - -
Lan3g1682 585 ProSiteProfiles Protein kinase domain profile. 199 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1682 585 PANTHER FLIPPASE KINASE 1-RELATED 38 585 - -
Lan3g1682 585 CDD STKc_phototropin_like 197 558 - -
Lan3g1682 585 Pfam Protein kinase domain 200 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1682 585 Pfam Protein kinase domain 435 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1682 585 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 38 585 - -
Lan3g1682 585 Gene3D Phosphorylase Kinase; domain 1 197 282 - -
Lan3g1682 585 SMART serkin_6 199 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1682 585 Gene3D Transferase(Phosphotransferase) domain 1 432 556 - -
Lan3g1682 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Lan3g1682 585 SUPERFAMILY Protein kinase-like (PK-like) 174 560 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1682 Lan-Chr3 29236465 29239611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1682 126 585 AGC Kinase Gene Family AT5G47750 70.947 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan3g1682 Pkinase 9.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1682 K08286 - gmx:100802402 897.116