Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1655 ATGAAACAAAGGCATGAAAACCCACACCAATATTCTTCTTCATCTTCTTCTCCAATGGAAGAACCAAAACAAAAGTGTTGGAGGCAACAAGTGGAGGAGAATCTTCACCGTCTCCACTCTCTCCACTTCGGCGCTGAACTCGCTCTCGATAACAACGATTTCCATTCCGCTCATATCTTCTCCCTCCGCCTCCTCGGCTTTCTCGATTCCCACACCGTCTCCGCCGTCGATGAAGCCTTCGTTCATCCCATTCGCCGTGAAGTCCTCGCCAAGGTTCACTCTATTCGTAGATCTCTCGTTCCTCATTCCGATCGGTATGCTTTTGAACAAGCAAAGAAAACTCCTGGACTCGTTTTTGGCGCAACTGGAGATATTGATATTGACAAGATTTGCAAGTCGAAATTCTTTCGAGCTCTTAATGAAAATGATGACAATCAATTGGGTGATCAGCAGGGGAAGCAACACAAGACATGTGGCAAGGAACCGAAGGAAAGGGTGCAAGCAAAATTGACAACCATATCTGAGAAAAGTACCTTCAAAACTAACAGCTCTGAGGACTGCATGGTTGTTGAAAGGCCTCAATCAAGTACCAAGGGTCGTGCTTTCTTTTCTTTTGATGAGGAAGAAAGAGCCTTTGCAAACACTTTTGGGAAAAAGCGTGCACACTTAGAAATTCATAGCCCCAAAGTTGGTTATGCAAATTCACCGTCAAGCAAGGAGGAAATTGATTCTGATGGCCATGGCAATGGGTTTGTTACTGCTAGAGCCAAATTGGAAATGGAAGCAAGGCAGAAGCGTGGAGGTGTTGGTTCACCAAGTGCAGCAGTCTCACCACAATGCGATAACAACCCTGCCAATAGGTTATATGGTGGGAGATCATACGGTGTTTCACGACGAGGTGTCCGTGGTAATTTTGTTCCTCCTATTAAATCCAATGGGAACAATGTTGGAAATATGACTTCACGAATTGGTGGAAAGAGTGATGATTCTTTAGAGGACTCTACTAAGAGATGTTTGGAAATGCTGTATGGGCCTGATGGCGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTCATTGAACATATTAGTAATGAAATTATGGATCGAGATCCCAATGTACGGTGGGATGACATTGCGGGATTGGATCATGCTAAGAAATGTGTCACTGAAATGGTCATATGGCCTCTGCTACGTCCTGACATATTTAAGGGCTGTCGTTCCCCTGGGAAGGGTCTGCTTCTATTTGGTCCACCAGGAACTGGCAAAACAATGATTGGAAAAGCCATAGCAGGGGAAGCAAAGGCAACTTTCTTTTACATATCCGCAAGTTCGTTGACAAGCAAGTGGATTGGAGAAGGAGAAAAGCTAGTAAGAGCTCTTTTTGGGGTTGCTAGTTGCCGTCAACCAGCAGTAATTTTTGTTGATGAGATAGATTCACTTCTGTCTCAGCGTAAGTCAGAGGGTGAGCATGAATCAAGTAGACGGCTAAAGACACAATTTCTAATTGAAATGGAAGGCTTTGACAGTGGTAACGAACAAATTTTGCTTATAGGGGCAACAAATCGTCCTCAAGAACTTGATGAAGCAGCACGAAGGAGACTTACTAAAAGACTTTATATCCCTCTACCCTCTTCAGAGGCAAGAGCTTGGATTGCACGTAACCTTCTAGAGAAAGATGGGTTATTCAAGCTATCAAACGAGGAAATAGATATCATATGCAACCTAACAGAAGGTTATTCAGGATCTGACATGAAGAACTTAGTGAAGGATGCTTCTATGGGTCCCCTAAGAGAAGCTTTAAAACAAGGCATAGAAATTACAAAGTTGAAAAAGGAGGATATGCGACCAGTAACCCTTAAGGATTTTGAAAATGCCCTACAAGAGGTGAGACCTTCGGTTTCCCCACATGAACTTGGCACTTATGATGAATGGAACAAGCAATTTGGAAGCCTTTCACTGTAG 1968 0.4365 MKQRHENPHQYSSSSSSPMEEPKQKCWRQQVEENLHRLHSLHFGAELALDNNDFHSAHIFSLRLLGFLDSHTVSAVDEAFVHPIRREVLAKVHSIRRSLVPHSDRYAFEQAKKTPGLVFGATGDIDIDKICKSKFFRALNENDDNQLGDQQGKQHKTCGKEPKERVQAKLTTISEKSTFKTNSSEDCMVVERPQSSTKGRAFFSFDEEERAFANTFGKKRAHLEIHSPKVGYANSPSSKEEIDSDGHGNGFVTARAKLEMEARQKRGGVGSPSAAVSPQCDNNPANRLYGGRSYGVSRRGVRGNFVPPIKSNGNNVGNMTSRIGGKSDDSLEDSTKRCLEMLYGPDGELPEKLRNLEPRLIEHISNEIMDRDPNVRWDDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIARNLLEKDGLFKLSNEEIDIICNLTEGYSGSDMKNLVKDASMGPLREALKQGIEITKLKKEDMRPVTLKDFENALQEVRPSVSPHELGTYDEWNKQFGSLSL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1655 655 SMART AAA_5 410 546 IPR003593 -
Lan3g1655 655 MobiDBLite consensus disorder prediction 1 25 - -
Lan3g1655 655 Gene3D - 545 631 - -
Lan3g1655 655 MobiDBLite consensus disorder prediction 305 331 - -
Lan3g1655 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 650 IPR027417 -
Lan3g1655 655 MobiDBLite consensus disorder prediction 308 325 - -
Lan3g1655 655 Gene3D - 373 647 IPR027417 -
Lan3g1655 655 PANTHER AAA DOMAIN-CONTAINING 91 652 - -
Lan3g1655 655 MobiDBLite consensus disorder prediction 8 23 - -
Lan3g1655 655 MobiDBLite consensus disorder prediction 267 288 - -
Lan3g1655 655 Pfam ATPase family associated with various cellular activities (AAA) 414 544 IPR003959 GO:0005524|GO:0016887
Lan3g1655 655 Pfam Vps4 C terminal oligomerisation domain 617 651 IPR015415 -
Lan3g1655 655 PANTHER FIDGETIN-LIKE PROTEIN 1 91 652 - -
Lan3g1655 655 ProSitePatterns AAA-protein family signature. 516 535 IPR003960 GO:0005524|GO:0016887
Lan3g1655 655 MobiDBLite consensus disorder prediction 229 248 - -
Lan3g1655 655 CDD AAA 407 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1655 Lan-Chr3 28809051 28817370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1655 329 653 Calmodulin-binding Proteins AT3G56690 31.343 1.91e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1655 K22766 - gmx:100789161 980.319