Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1648 ATGAATATCATAAGGATAATATTAATGGCTATGTTTATTGTTTTTAATATTTTATCTAAGGGTGAAGGAAAACTAGTAGAGAATTTCTACAATTCAACTTGTCCAAATGTTGAATCCATTGTGAGGGATGCAGTTACCAAGAAGTTTAAGGAAAAAAATATAACTGGACAAGCAACTTTGCGTCTATTTTTCCATGATTGCTTTGTTGAGGGATGTGATGCCTCAGTGATAATAAGTTCACCAAATGGGAATGCAGAGAAAGATGCATCAGAAAATCTTTCACTAGCAGGAGATGGATTTGACACTGTGATCAAGGCAAAACAAGCAGTTGAAATTGTATGCCCTAACATAGTCTCATGTGCTGACATTTTAGCACTTGCTACTAGAGATGTTATAACCTTGCTTGGAGGCCCTTCATTCAATGTAGAACTTGGACGTAGAGATGGTCTTGTTTCTCAAGCATCACGTGTGGAAGGAAAACTTCCGAAATCAAATTTCGATCTAAACCAACTAAACACGATGTTCTCACACCACAACTTGACCCAAACCGATATGATCGCACTTTCTGGTGCGCACACGATAGGTGTCTCACATTGTGACCAATTTGCAAACCGTTTATACCCATCTATAGATCCTACATTGGACTTCAACTACGCCCAACAATTGAAAGCAACATGTCCTCAAAATCCTGATCCCGACACAGTTTTCTCATTGGATATTGAAACTCCTCGCATTTTTGACAGCTTGTATTACAAAGATTTGGTTTCAGGAAAAGGGTTGTTGAGTTCAGATCAAGTGTTGTTCACTAACCCTAAATCAAGGTCTACAGTGATTGACTTTGCTAAGAACCCTAATGAGTTTAATGATGCATTTGTTATTGCTATGAGGAAACTTGGAAGGGTTGGGGTCAAAACTGGTAACAAGGGAGAAATTAGAAGAGATTGCTCAAAATTCAATTCTTGA 963 0.379 MNIIRIILMAMFIVFNILSKGEGKLVENFYNSTCPNVESIVRDAVTKKFKEKNITGQATLRLFFHDCFVEGCDASVIISSPNGNAEKDASENLSLAGDGFDTVIKAKQAVEIVCPNIVSCADILALATRDVITLLGGPSFNVELGRRDGLVSQASRVEGKLPKSNFDLNQLNTMFSHHNLTQTDMIALSGAHTIGVSHCDQFANRLYPSIDPTLDFNYAQQLKATCPQNPDPDTVFSLDIETPRIFDSLYYKDLVSGKGLLSSDQVLFTNPKSRSTVIDFAKNPNEFNDAFVIAMRKLGRVGVKTGNKGEIRRDCSKFNS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1648 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Lan3g1648 320 SUPERFAMILY Heme-dependent peroxidases 25 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PANTHER - 6 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Lan3g1648 320 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 Gene3D - 28 316 - -
Lan3g1648 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1648 320 Gene3D Peroxidase, domain 2 163 299 - -
Lan3g1648 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Lan3g1648 320 PANTHER PEROXIDASE 6 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1648 Lan-Chr3 28719847 28722153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1648 8 319 Peroxidase AT5G14130 59.688 2.34e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1648 K00430 - gmx:100812082 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1092 10 16087633 16089863 Lan3g1648 3 28719847 28722153 LSH
Lan6g1754 6 28785935 28788207 Lan3g1648 3 28719847 28722153 LSH