Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1638 ATGGAGAATTATTCCATGTTGTTCACTTATCCTTCTTCTTTAACAAGTGTTGTGGGAAACTCTGAACATGGTTTTAGTGGTATGAATGGTCAAAGTTCAAATAGTATTGGTCTTGATCAGAAGTTGCTGAGAAGAGAAGAAGTTCATAGAGATGGAATATTGTCTCATCAAATAAGTGGAAGAAGGATTAGTGTGAGTGATGAACTTGGTGATTCAGGTAATAATAATAATAATAATAATAAAAAGAAAGGAGAGAAAAAAGTTAAGAAGGGTAGATATGCTTTCCAAACAAGGAGTCAAGTTGATATACTTGATGATGGATATAAATGGAGGAAATATGGCCAAAAAGCTGTTAAGAACAACAAATTCCCAAGGAGTTACTACCGGTGCACGCATCAAGAGTGCAATGTGAAGAAACAAATCCAACGCCTTACCAAAGATGAGGGTGTAGTTATGACCACCTATGAGGGAATTCACACTCACCCTATTGAAAAGAAAACAGATAATTTTGAGCATATTTTGACTCAGATGCAAATATACACTCCTTTACCCTTTTGA 558 0.353 MENYSMLFTYPSSLTSVVGNSEHGFSGMNGQSSNSIGLDQKLLRREEVHRDGILSHQISGRRISVSDELGDSGNNNNNNNKKKGEKKVKKGRYAFQTRSQVDILDDGYKWRKYGQKAVKNNKFPRSYYRCTHQECNVKKQIQRLTKDEGVVMTTYEGIHTHPIEKKTDNFEHILTQMQIYTPLPF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1638 185 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan3g1638 185 Gene3D WRKY domain 86 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan3g1638 185 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan3g1638 185 MobiDBLite consensus disorder prediction 65 91 - -
Lan3g1638 185 SUPERFAMILY WRKY DNA-binding domain 96 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan3g1638 185 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan3g1638 185 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 51 180 - -
Lan3g1638 185 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 180 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1638 Lan-Chr3 28377477 28380151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1638 92 183 WRKY Transcription Factor Family AT5G13080 82.609 1.06e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan3g1638 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1638 - - ccaj:109792402 239.195