Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1635 ATGGATCCCAAGGGTTCAAAGCAGCCACAACAACAAGGAAACAACAACATGGGAGAGAACAAGATATCAGAAGTGAAGGATTTTCAGATTATGATTGCTGAGAAAGAAGATAGTAGCAAGAAACAGTTAGCACCAAAGAGAACTTCAAACAAAGACAGACACACAAAAGTTGAAGGTAGAGGAAGGAGGATAAGGATGCCAGCTTTATGTGCAGCTAGGATCTTTCAGTTGACAAGAGAATTGGGTCATAAATCTGATGGAGAAACAATTCAATGGTTACTCCAACAAGCTGAACCATCTATTATAGCAGCTACTGGAACTGGAACAATACCAGCATCAGCTTTAGCTTCTGCTGGTAACTCAGTTTCACAACAAGGAACTTCTCTATCTGTAGGGTTGCACCAAAAACTTGATGAGTTAGCTGGAGGGTCTAATATTGGGTCAGTGAATAGGACTAGTTGGGTTGGAGGGAATTTAGGGAGACCCTATGTGGCCACAACAGGTTTATGGCCACCCCATGTTAGTGTATTTGGGACTGAAGGTTCAAGTTATCTTCAGAAAATTGGGTTCACTGGGTTTGACTTGCCTGGTGCACCAAACAACATGGGTCATATGAGTTTCACTTCAATTTTGGGTGGTGGGGCTAACCAGCAGATGGATGGTTTGGAGCTTGGGTTGTCTCAAGAGGGTCATATTGGGGTCTTGAATCCACAGGCCTTGAGCCAGATTTATCAGCAGATGGGTCAACAAGGTAGAGTTCAACAACAACAGCAGCACCAGCACCAACACCAGGCTCCTACTACTGAGGATGATTCTCAAGGTTCAGAACAGTAG 834 0.4388 MDPKGSKQPQQQGNNNMGENKISEVKDFQIMIAEKEDSSKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALASAGNSVSQQGTSLSVGLHQKLDELAGGSNIGSVNRTSWVGGNLGRPYVATTGLWPPHVSVFGTEGSSYLQKIGFTGFDLPGAPNNMGHMSFTSILGGGANQQMDGLELGLSQEGHIGVLNPQALSQIYQQMGQQGRVQQQQQHQHQHQAPTTEDDSQGSEQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1635 277 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 1 276 - -
Lan3g1635 277 MobiDBLite consensus disorder prediction 28 60 - -
Lan3g1635 277 ProSiteProfiles TCP domain profile. 50 104 IPR017887 -
Lan3g1635 277 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 276 IPR005333 GO:0003700
Lan3g1635 277 Pfam TCP family transcription factor 48 183 IPR017887 -
Lan3g1635 277 MobiDBLite consensus disorder prediction 1 22 - -
Lan3g1635 277 MobiDBLite consensus disorder prediction 246 277 - -
Lan3g1635 277 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1635 Lan-Chr3 28313807 28315660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1635 23 244 TCP Transcription Factor Family AT3G27010 61.250 1.92e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan3g1635 TCP 7.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1635 - - lang:109344348 519.62