Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1625 ATGGGAAGGTGTTGGTTTCTTGAGTTGTTGTTTGTAGGAAGCTATGTTTGCTTGCTATGTAATGTTGGGGTTGAAGGGTACCCTACAGAGGATCTAGTTAAGAGGCTACCTGGCCAACCCAAAGTTGAGTTCAAACAATATGCAGGGTATGTTGACATAGATGTTAAACATGGGAGGAGCTTGTTCTACTATTTTGTGGAAGCTGACCATGACCCTGATAATAAGGCCTTAACCCTTTGGCTCAATGGAGGCCCTGGATGTTCATCAATCGGAGGAGGGGCCTTTACTGAATTGGGCCCCTTTTATCCTAAAGGTAATGGACGTGGTCTGCGAAGAAATTCAATGTCTTGGAATAGAGCATCGAACCTTCTCTTTATCGAGTCTCCTGCTGGAGTAGGTTGGTCATACTCAAATACTACTTCAGATTATAACACTGGAGATGCATCCACCGCCAATGATATGCTTTTGTTCTTCTTGAAATGGTATGAGAAGTTTCCATCTTATAGATTAAGGGAGCTATTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAATTAGCTAATGCTATTCTGGACTACAATGCTCATTCAACTGATTTCAAATTCAATATTAAAGGAGTTGCGATTGGAAACCCACTTCTGAAACTTGATCGTGATACACAAGCAACATATGAATACTTCTGGTCTCATGGAATGGTTTCTGATGAAATTGGCATTGCCATTATGAATGATTGTGATTTTGATGATTATGTCTTTGAAAATCCTCACAATCTATCTAAATCTTGCAATGATGTCATATCTGAAGCAAATGAAATTGTTGGAGAATATATAAACAACTATGATGTGATTCTTGATGTTTGTTATCCATCCATAGTTGAACAAGAATTGAGATTGAAAAAAATGGCTACTAAAATAAGTGTAGGTGTAGATGTTTGTATGACTTATGAAAGAAGATTTTACTTAAACAACCCTGAGGTTCAAAAAGCTCTTCATGCAAACCGTACAAATCTTCCTTATCCATGGTCCATGTGTAGTGGTGTTTTAAACTATAACGACAATGATCCTAACATCAATATCCTTCCAATTCTCAAAAGGATAGTTCAAAATCATATTCCAGTATGGGTTTTCAGTGGAGACCAAGATTCCGTAGTGCCATTACTGGGTTCTCGAACACTGATTCGTGAACTAGCTCACGAACTCAAGTTCAAGATTACAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTGTTGACATTTGCAACTGTAAGAGGAGCTGCTCACATGGTACCTTATGCACAACCTTCAAGAGCACTCCATCTATTTAGTTCTTTTGTGCATGGAAGGAGGTTGCCAAATACAACAAAACCTTCAATTGATGAATAA 1422 0.3889 MGRCWFLELLFVGSYVCLLCNVGVEGYPTEDLVKRLPGQPKVEFKQYAGYVDIDVKHGRSLFYYFVEADHDPDNKALTLWLNGGPGCSSIGGGAFTELGPFYPKGNGRGLRRNSMSWNRASNLLFIESPAGVGWSYSNTTSDYNTGDASTANDMLLFFLKWYEKFPSYRLRELFLTGESYAGHYIPQLANAILDYNAHSTDFKFNIKGVAIGNPLLKLDRDTQATYEYFWSHGMVSDEIGIAIMNDCDFDDYVFENPHNLSKSCNDVISEANEIVGEYINNYDVILDVCYPSIVEQELRLKKMATKISVGVDVCMTYERRFYLNNPEVQKALHANRTNLPYPWSMCSGVLNYNDNDPNINILPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVHGRRLPNTTKPSIDE* 474
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1625 473 Gene3D - 314 350 - -
Lan3g1625 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Lan3g1625 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Lan3g1625 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Lan3g1625 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Lan3g1625 473 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Lan3g1625 473 Gene3D - 361 460 - -
Lan3g1625 473 Gene3D alpha/beta hydrolase 28 290 IPR029058 -
Lan3g1625 473 Pfam Serine carboxypeptidase 38 460 IPR001563 GO:0004185|GO:0006508
Lan3g1625 473 PANTHER CARBOXYPEPTIDASE 8 467 - -
Lan3g1625 473 SUPERFAMILY alpha/beta-Hydrolases 25 467 IPR029058 -
Lan3g1625 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 467 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan3g1625 Lan-Chr3 28096893 28107895 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1625 320 463 Calmodulin-binding Proteins AT2G22960 25.694 7.16e-12 62.4
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0734 15 16271935 16278072 Lan3g1625 3 28096893 28107895 LSH