Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1619 ATGGTGCCTCCGGGGCCACCCACTCCTATTGGTGGTGCCCAGTCTGTCAACGCTTCTCTTTTGAGATCAAATTCAGGGATGCTAGGAGGTCAAGGAGGTTCCATGCCTTCACAAAATTCTTTCCCTTCGCTTGTGTCGTCGCATACTCAGTTCAACAACATGAATATTCTGGGAAATATGTCCAATGTAACTTCCACACTGAATCAATCTTTCCCAAATGGAGTTCAAAATCACGGGCTTTCTGGCCCAGGAAGTAGCCAGCGTGGAGTGGTTTATACTGGAGCTGAGACAGATCCACTCTCCAGTGTTGCCAATGGAATGAACTTCAGTAATTCTTCGTCCTCATTTGTACAAGCAAATATGGTGAATGCTGGTGGTTCTTCTGGTCTAGGTCAGGGTCAACAATTTTCAAACCCTTCAGGTAATCAACTGCTGTCAGATCAACAGCATTCCCAACAGATTGAGCCTCAAAGTTTCCAACATAGTCAGCAGTCGATGCAGCAGCTCTCTGCTCCTCTGAGTACACAGCAGCACTTTCAATCAATGCGAGGAGGGATAGGTGGTATGGGACCAGTGAAGTTAGAGCCCCATGTAAATAATGATCAACTTGGACAGCAGCAGCAACAGCAGTTGCAATCATTGAGGAGTCTTCCTCCGGTTAAAATGGAACCACAACAACTTCAACAAATGAGAAGTCTTCCACCAGTAAAAATGGAGCCCCAACATTCTGATCAACCATTATTTTTGCATCAACAACAGCAGCAACAACAACAGCAGCAGCAATTCCTCCACATGTCTCGGCAACCATCTCAGGCTGCTGCTGCTCAGTTTAATCTTTTGCACCAACAAAGGCTTTTGCAATTACAGCAACACCAGCAGCAACTATTGAAGACAATGCCTCAACAACGGCCTCAATTACCACAGCAATTTCAACAGCAGAATATGCCTATTAGATCTCCTGTGAAACCATCATATGAACCTGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAGCATAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAGTTTGTTGCCGAGTATTTTGCTCCTAATGCCAAAAAGAAATGGTGTGTTTCTTTGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGCAATCGTAAACCTGGGCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTACAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTGCTTTATGTTGACATGCCACGCGAATATCATAATTCCTCTGGCCTGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTCTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTGTTTTCTCAAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAACTTGGAGTGGTTGCTCAAAAATACCAGTCTTTTAGTCAAAGTGCCACACCAAATATATCTGTTCCGGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGCTGGCTAAAGCTTTAGAAGTTCCGTTAGTTAATGATTTAGGATATACGAAGAGATATGTGCGTTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAACAGGGACTGGACCGATGGAGAGCTTAGCCAAATTCCCTCGCAGAAATAATAGTTCAGCTGGGCCTCGTGGTCAAGCACAACAGCATGAGGATCAATTACAGCAACAGCAAAATTTGGCTCATAACTCAAATGGTGATCAAACTTCATCTTCGCAACCCAGTCCCACCCAATTTTCTTCTAACAACGGTATGGTTAGGGTAAATAACTCTGTTAGCTCAGCACCTGCATCAACCACCACAAGCACTATTGTTGGACTTCTCCACCAAAACTCTATGAATTCTAGACAAAATTCAATGAACAATGCATCCCCAGGTTCCTCCAGTACTATGCCACAGGCCCAACCAAACCCATCCCCTTTTCAAGCACCGACACCATCTTCGTCTAACAACCCCCAACAAACACCTCACCCTTCCTTAACTTCTGCCAATCACATGAATACAACAAATTCACCTGCTAATATTTCCATGCAACAACAGCAGCCATCTCTTTCCAGTGAAGCTGACCTTACCGATGCTCAGAGCTCAGTCCAGAAAATCATACACGAGATGTTCATGTCGTCCCAGATGAACGGCACAGGTGGGATGGTTGGAGTTGGATCTCTTGGAAATGACATGAAAAATGTAAATGGTGTTTTGCCAATGAGTACCAATGCAGGGATGAACAGCAGCAGTGGCCTGATCGGCAATGGTGCACTGAACACTAATTCAGGCATCGGGGTTGGTAGTTACAGGACAATGAATTTTGGTCAATCTGCAATGGCTAATGGAATGAGAACTTCTATGGGAAATAATTCAGTCATGAATGGAAGGGGAGGAATGGCATCCATTGCCAGGGATCAAGCTATGAATCATCAACACGATTTGTCGAATCAACTACTCAGCGGGCTCGGAGCTGTAAATGGTTTTAATAATCTCCAATTTGATTGGAAACCATCTCCATGA 2676 0.4398 MVPPGPPTPIGGAQSVNASLLRSNSGMLGGQGGSMPSQNSFPSLVSSHTQFNNMNILGNMSNVTSTLNQSFPNGVQNHGLSGPGSSQRGVVYTGAETDPLSSVANGMNFSNSSSSFVQANMVNAGGSSGLGQGQQFSNPSGNQLLSDQQHSQQIEPQSFQHSQQSMQQLSAPLSTQQHFQSMRGGIGGMGPVKLEPHVNNDQLGQQQQQQLQSLRSLPPVKMEPQQLQQMRSLPPVKMEPQHSDQPLFLHQQQQQQQQQQQFLHMSRQPSQAAAAQFNLLHQQRLLQLQQHQQQLLKTMPQQRPQLPQQFQQQNMPIRSPVKPSYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLYKIKYESGTLEELLYVDMPREYHNSSGLIVLDYAKAIQESVFEQLRVVRDGQLRIVFSQDLKICSWEFCARRHEELIPRRLLIPQVSQLGVVAQKYQSFSQSATPNISVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRNNSSAGPRGQAQQHEDQLQQQQNLAHNSNGDQTSSSQPSPTQFSSNNGMVRVNNSVSSAPASTTTSTIVGLLHQNSMNSRQNSMNNASPGSSSTMPQAQPNPSPFQAPTPSSSNNPQQTPHPSLTSANHMNTTNSPANISMQQQQPSLSSEADLTDAQSSVQKIIHEMFMSSQMNGTGGMVGVGSLGNDMKNVNGVLPMSTNAGMNSSSGLIGNGALNTNSGIGVGSYRTMNFGQSAMANGMRTSMGNNSVMNGRGGMASIARDQAMNHQHDLSNQLLSGLGAVNGFNNLQFDWKPSP* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1619 891 Coils Coil 604 624 - -
Lan3g1619 891 MobiDBLite consensus disorder prediction 671 693 - -
Lan3g1619 891 MobiDBLite consensus disorder prediction 577 657 - -
Lan3g1619 891 MobiDBLite consensus disorder prediction 590 657 - -
Lan3g1619 891 MobiDBLite consensus disorder prediction 671 749 - -
Lan3g1619 891 MobiDBLite consensus disorder prediction 23 44 - -
Lan3g1619 891 MobiDBLite consensus disorder prediction 703 749 - -
Lan3g1619 891 Pfam LIM-domain binding protein 333 587 IPR029005 -
Lan3g1619 891 MobiDBLite consensus disorder prediction 126 197 - -
Lan3g1619 891 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 890 - -
Lan3g1619 891 MobiDBLite consensus disorder prediction 126 182 - -
Lan3g1619 891 PANTHER LIM DOMAIN-BINDING PROTEIN 1 890 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1619 Lan-Chr3 28019022 28043581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1619 1 887 C2H2 Transcription Factor Family AT1G43850 58.643 0.0 720
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0574 14 12084058 12094305 Lan3g1619 3 28019022 28043581 LSH