Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1618 ATGTCGTTAGTTAGACCTGCAAAGCTAGTTCCTACATCATATAAAAATGGCAAGCTCTACTCATTAAAGGGAACCGAAGTTACATCGGGCTTGTCCTCCCAAATTTTTGGTCCTGAAAAGCAAAGAACCATGTACATGACAGATGATGAGTCCATTGAGAGTTACGAGAAGTACTTCCAAGACTCGTCAATAGAACTGATAGAACCATCTATTTCCAGCATCTCTGGAGGTTCAATTCACCCTGATGGTGCATCTTCTTACGAGCTAAGAGCTCGTTTGGCAACTCCTACTTCTTTCGTCTCTGGGAGGCATCAAGATGCCTATCAGTCCAATTTCGGATCAGATTTCTTGGAAAATGGATGCCTTGATTCGCTTGATGTCGATGGTCTAATGAAATTAAAACTACAAGCATTGGAGAGGGCGTTGCTTGATGATAGCGATGTTGAGGAAGAGGAAGAAGCCATATTTGGGACTTCCCAAAGCATGGAAATCGATCCGAATATTGCTGAATGGGCTGATCCTATTCAGAGTATGCAACTCGAGGACTCACCAAAGGAGTCTTCATCTTCAGGTTCCAACCTTAGCAGCATCAGCATCAGCAAAGAAATATCACGAATTTCTCAGACCCCCAAGCATCTGCTTTATGAATGTGCTGTTGCACTTTCAGAAGGAAACGAAGAGGAAACCTTATCTAGGATAAATGGTCTCCGCCAAATGGTCTCAATTCAAGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTGGAGGGACTTGCAGCACGCCTGGCTGAATCGGGGAAAGGTCTTTATAAAGCTCTGAAATGCAAAGAACCTCCTTCTTCAGACCGTCTCGCAGCCATGCAGATACTGTTTGAGGTTTGCCCATGTTTTAAATTTGGATTTATTGCTGCAAACAATGCAATTATAGAGGCAACTAAAGATGAGTTGAATGTTCACATAATAGATTTTGAGATCAATCAAGGTAGTCAATACATAAATCTAATACAACAACTTGCCTCGAGGTCCAATAAGCCACCTCGTGTTAGATTGACTGGAGTCGATGATCCCGAGTCTGTGCAAAGATCTGTTGGAGGCCTAAATGTCATTGGACAAAGACTTGAAAAACTGGCGGAAACACTTGGTTTGCCATTTGAGTTTCGGGCAGTGGGATCGAGGACTTCCCTTGTCACCCCACAAATGCTCAATTGTCATCCTGGAGAAACACTTGTAGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCGACTGTAAATGAACGAGACCAACTTCTCCGCTTGGTTAAGAGCTTGAATCCGAAGCTGGTAACAGTTGTGGAGCAAGATGTGAACACTAACACCACCCCTTTCTTACCAAGATTTTCCGAAGCCTACAAATACTACTCTGCTGTGTTTGAGTCGCTTGATATTACACTTCCTAGGGAGAGTCAAGATAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGATATTGTTAATGTTGTTGCGTGTGAAGGCGAGGATAGGATAGAACGGTATGAAGTCGCTGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTTGTTTCATCCCCGATGAGCACGAATGTGACCGCTGAAATCCGAAAGCTCATTAAGATGTACGGCGACAGGTTCAAAATAAAGGAGGAGATGGGAGCACTTCATCTTGGGTGGGAAGATAAAAACTTGATTGTTGCTTCAGCATGGAAATGA 1743 0.4349 MSLVRPAKLVPTSYKNGKLYSLKGTEVTSGLSSQIFGPEKQRTMYMTDDESIESYEKYFQDSSIELIEPSISSISGGSIHPDGASSYELRARLATPTSFVSGRHQDAYQSNFGSDFLENGCLDSLDVDGLMKLKLQALERALLDDSDVEEEEEAIFGTSQSMEIDPNIAEWADPIQSMQLEDSPKESSSSGSNLSSISISKEISRISQTPKHLLYECAVALSEGNEEETLSRINGLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKGLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAIIEATKDELNVHIIDFEINQGSQYINLIQQLASRSNKPPRVRLTGVDDPESVQRSVGGLNVIGQRLEKLAETLGLPFEFRAVGSRTSLVTPQMLNCHPGETLVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFSEAYKYYSAVFESLDITLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFVSSPMSTNVTAEIRKLIKMYGDRFKIKEEMGALHLGWEDKNLIVASAWK* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1618 580 Pfam GRAS domain family 211 580 IPR005202 -
Lan3g1618 580 ProSiteProfiles GRAS family profile. 201 580 IPR005202 -
Lan3g1618 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 579 IPR005202 -
Lan3g1618 580 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 11 579 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1618 Lan-Chr3 28013275 28016897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1618 1 580 GRAS Transcription Factor Family AT1G21450 60.101 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan3g1618 GRAS 9.1e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1618 - - gmx:100798897 864.759