Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1592 ATGATGGCGCCGGATCTCAGTACCTGCAACGAAGCCACACCACCGCGCCGGAGTACCCGGCGGCGGTTGGTCCAGTCCACACTCTTCCCTCACAAGCCACCACCAGAGGCCAATCAGAAAGACGATAAAGAAGATGAACATGATGATGATTACTGCATCACTGAGAAGAATCGCAAGAAGAGAAAATCCAAGGCAGCAAAAACCACTCCTCCAAAGAAACCTCCAAAATCAAAGAAACAGAATTGCTCGCCGAAGAAAAATGGACCAATTAATGGTGTTAAGGAGTTAACTTTGGGGCAAATGTTGGCAGATTCAGTTCAGGCGGATACACACGTGCCTGATTTGCGCTTAGAGGCGAAAATCTCGGCCGAGGAAAATTCAAGGATGTATGCAGGACGGGAAATGCATCCTCTTTTTGCACCGCGGAAGGTGAACAAAAGAGTTCAGGATGTGGCTGAATCAGGCAGTAATTTTTCCACAGTTGAGAGGGCTGTTGAAAGAATTACCTGTGGTCCTATTCATGTATTTGAAAATATTCAGGATGATACCTCTCTCCTTGACTGGGGAGAGTGGACATTTTTAGGAAAGACCACCTATGTGAATTGCAGTCCAGAAAGTTCAAATTCTTTTGTTTTGGAGGGCTCTGTTGAATCCTTAAACTTTGATAAGCTTAATAGCCCTTCGGATCCCACAGGTGCTTCACTTTCTCAGACTGCCTTGCCTTCTTCAGATCAACCTTCTATACAGCCAGAAAATTTGCAAGAAATATCACCATCAAACTCAACTTTGCAAGTTAATGAGCAAACAGACGTGGAGGTGGATATATCTGCGACCTTTTCTGGGCAAGATGATATTTTCGGAGAATCACATGTGAAACCATCAAGTAGATTTCTTCAAGAAAGTATGAAGTCATACTACCATAGTGAAGGTAAGACTAAGGACTGCTTATGGACTTACAAGTACAAGCCAACAAAAGCCATTGAGGTGTGTGGTAATGATGAAGCTGTGAATTTCTTGCGTGACTGGCTTCATCAATGGCATGAAAGACGCTATCAAAGCAGGAAAGATTCTTCAATCAGAGATAAAATTGACATTCAAGATGATGATGATTATATCTGTTCTGGTAGTGACTACGATTCAGAAGATATAAACAAGGAGGACTCCCTGCAAAATGTTCTTTTAATTACAGGACCAATAGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCGAGGAGCAAGGTTTTGAGATTTTAGAGCTCAATGCATCAGACTGCCGAAATGGAATTGCTGTCAAGCAGTATTTTGGAGATACTCTTGGATCACATGGGTTCAAAAGGTTATTGGAACACACAGCGAGTTCACAGAATAAAACTACAAAATTATCCTCATCTCCGGCTTTACCTAATGGTAAGGCATCTGACAAGATGGATGATGGCGTGGTTGAACTAATAACCGTATCCGATGATGAAGCTCATAACCTGTGTGGAACATCACAGAAGTTACTTGGCAAAAATAATGTATTTGCAGTTCAAACTTTAATTCTAGTTGAGGAGATCGACATCCTTTTTCCGGAAGATCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACAGCAAGGGGACCAATAATATTGACCAGCAATAGTGATAATCATGGTCTGCCAGATAGTTTTGATAGGCTACATGTTTCTTTTTCATTGCCATCACCTAAGGAGTTGCTTTGCCATCTATACAAGGTTTGTGTCACAGAAGGAGTTAATGCCCATCCTCTCTTACTAGAGAAGTTTATACAGTCTTGTGATGGAGATATCCGAAAAACCATAATGCATCTTCAATTCTGGTTCCAGAGTGAAAGATTTAGAAAAGATGGGAAAGTGCAAACAATTTATGGCTCACTTCCATTTGATCTTGAAGTTGCCCATCAGATACTACCAAAGATAATGCCCTGGGATCTCCCCTCAGAGTTGTCTGAAAAAATTGAGAACGAAATTGCCAAATCAATATCCATAATGGAAGAAAACTCTAGCTTGCAAGGGTTAGTCAAGGAAGAGCTTCAAATACATGAAAGAGTAAATGATTTAGATGTGCAGTTTGGGAAGACGGATTATATAGAGGCCATGAAGATGGAGATGATTAAGAGAAATGGATCTATAACAGACTACAGTGAGTTTGAAATTCAATACAATGCTATTTCTGAATTTTCCAACTGTTCTGGATCCCCACTAGCGTCCTCTAAGCAACATGGTCAAAGGAAACTTGTAGTGATGTCCTCTGATTCTGAGGATGAGGATCCAAATAATGGACTTCCTTTTGACAAAGCTAGAAAGAGGCAATCCCTTGAAGACAACAATGAATCTTCCTCTGAGATAAAGTTGAGTGAAAATTATTCCAGAGCATCATTTCACAAGCTGGTTTGTTCTGAATTGGAGGATTCAGAGGAGGAACATTTTAAATTTTCAGAAACAGCGGATGATACATGCTTAAATGAAACATGCAGATCATTGGATATATCTTGTGTGCCAGAATCAACATTTGTTCCTGAGACTGTAATTGAAAATGAAATAGATACTATGTCTGAAGCAGTGTCTTCAGGCCATCTTGTTGGTCCTCTTCAAGTTTCTACGAATAAAAAATTGATACCATCCACTTTCAGTAGTCGTAAGCGCTTGAAGAAAATGGCTCAAAATTCAGATTTGCTGATGAATACTGAAATTCAAGGGTCTTTTTCAAAAGATGTGCAATATTTTCTAGATGAAAAGATTGAAACTAAAATTGCCAATGTGATGGATGAATGCAGTTGTGTGGGTTTCACACCAAACTCGAAGTTTGTTGAGCCCATTCCATCAATAGAGACAGATGTAGTACAAAAGTTGTGGAAAGAATTTCGTGATTGTCGAATGGACTTAAGACAACATTCCAACTCTGAAGAGGCAGGTGCTATTCAACTTTTTAATCTTGCTGGTGGGCTGAGCAATCTAATTTCAGAAGCTGACCTGCTTCATAACCACCAACATAAACTATGTGATATTATGGAATCTCCGATGTTCCTTTCTGATCAAGTGGCATCTAGTGGTCATGATGAGCAAATGATGATGTCCACTTTTGCTGAACATGGTTTTTGCTTTTATGCTAAACAAATAGCAGACATGCGATTAAAGTTGGGTCATGAGAACAAGTTTGATTTAACTTCTGAGATGTTGGCTTCCACAACTAATGTTATGGCATTGGGGAAATTATCTAGGCAGGACCCCAGCAAAAGCACAAATATCTATACTGAAAAGCAATTAGAAATGAACAACCCAATAAGTCATATGCAGAAGAGTGAAAACAGAACATCTCTCTCCAATGTCATCCAGTCCATTGTCCCTGCAAGAATATCCTTGTCTTTGAGAGATGTTGCAATTAATGAATATTTATCCTCATTGCGCCGAATTTCAAGGTCAGAAGCATCCCGCATTTCAGAAAGTGTTCAGATGAAGAGAAGAGGAAGGGTGCGGGGTTTTCAACATTACTTGAGCAGATGTACAATGTTGTCTCCGGAAGATATAGCATTTGTGAGTGAGAGTGATTTGTACAGAAAGATTTCTTCACTATGCCCAGCTGAAGTGGAAAACAATCATGCATGA 3633 0.4021 MMAPDLSTCNEATPPRRSTRRRLVQSTLFPHKPPPEANQKDDKEDEHDDDYCITEKNRKKRKSKAAKTTPPKKPPKSKKQNCSPKKNGPINGVKELTLGQMLADSVQADTHVPDLRLEAKISAEENSRMYAGREMHPLFAPRKVNKRVQDVAESGSNFSTVERAVERITCGPIHVFENIQDDTSLLDWGEWTFLGKTTYVNCSPESSNSFVLEGSVESLNFDKLNSPSDPTGASLSQTALPSSDQPSIQPENLQEISPSNSTLQVNEQTDVEVDISATFSGQDDIFGESHVKPSSRFLQESMKSYYHSEGKTKDCLWTYKYKPTKAIEVCGNDEAVNFLRDWLHQWHERRYQSRKDSSIRDKIDIQDDDDYICSGSDYDSEDINKEDSLQNVLLITGPIGSGKSAAVYACAEEQGFEILELNASDCRNGIAVKQYFGDTLGSHGFKRLLEHTASSQNKTTKLSSSPALPNGKASDKMDDGVVELITVSDDEAHNLCGTSQKLLGKNNVFAVQTLILVEEIDILFPEDRGCIAAIQQIAETARGPIILTSNSDNHGLPDSFDRLHVSFSLPSPKELLCHLYKVCVTEGVNAHPLLLEKFIQSCDGDIRKTIMHLQFWFQSERFRKDGKVQTIYGSLPFDLEVAHQILPKIMPWDLPSELSEKIENEIAKSISIMEENSSLQGLVKEELQIHERVNDLDVQFGKTDYIEAMKMEMIKRNGSITDYSEFEIQYNAISEFSNCSGSPLASSKQHGQRKLVVMSSDSEDEDPNNGLPFDKARKRQSLEDNNESSSEIKLSENYSRASFHKLVCSELEDSEEEHFKFSETADDTCLNETCRSLDISCVPESTFVPETVIENEIDTMSEAVSSGHLVGPLQVSTNKKLIPSTFSSRKRLKKMAQNSDLLMNTEIQGSFSKDVQYFLDEKIETKIANVMDECSCVGFTPNSKFVEPIPSIETDVVQKLWKEFRDCRMDLRQHSNSEEAGAIQLFNLAGGLSNLISEADLLHNHQHKLCDIMESPMFLSDQVASSGHDEQMMMSTFAEHGFCFYAKQIADMRLKLGHENKFDLTSEMLASTTNVMALGKLSRQDPSKSTNIYTEKQLEMNNPISHMQKSENRTSLSNVIQSIVPARISLSLRDVAINEYLSSLRRISRSEASRISESVQMKRRGRVRGFQHYLSRCTMLSPEDIAFVSESDLYRKISSLCPAEVENNHA* 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1592 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 640 IPR027417 -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 58 80 - -
Lan3g1592 1210 CDD AAA 393 451 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 1 92 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 222 262 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 768 790 - -
Lan3g1592 1210 Gene3D - 314 567 IPR027417 -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 11 25 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 741 766 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 741 793 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 456 475 - -
Lan3g1592 1210 Gene3D - 570 630 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 456 470 - -
Lan3g1592 1210 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 70 1203 IPR004582 GO:0006281
Lan3g1592 1210 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 70 1203 - -
Lan3g1592 1210 MobiDBLite consensus disorder prediction 35 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1592 Lan-Chr3 27550809 27559288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1592 317 428 Core DNA Replication Machinery Family AT5G22010 30.357 4.04e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1592 - - gmx:100784209 1389.02