Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1586 ATGTCCATCACCATGAACATGGACATCTATGCCATCAATGACCTAGACTTCTCTGAATACACCACCACAACCTCCTCCGATACTCACACTTCCGACGATGGTCACGGTTATAATTGGAACCACTGGTCCCCCATCGTCAACTGGGACGCTCTCACCGGTGACCAAAACTGTTTCCACGGCCTCATCGATTCTCTCATGGATGACGTCGCCACCGCCGGCGTTAATCTTAGCCCTATAAACCACCAAGATGCCTGTAACTCCCCTTCCACTACCTCGGAAGACATAACCACCACCACTGACGACATAACCACCTCTGCATGTGAGGAGGAAGTAGCTGCAGCAACCACCGGCGACGTGGATTTCAACGGTCTAAAGTTGATCCACTTGATGATGGCGGCGGCTGAGGCCCTCTCCGGCGAGAACAAGAGCCGCGAACTGGCTCGAGTGATATTGGTTCGGCTCAAAGAATTGGTTTCCACAACCCACGGCACCAACATGGAACGTCTTGCAGCGTATTTTACCGAAGCCCTACAGGGTTTGCTAGATGGCACAGGATGTGCACACAACAACAAGCACTATAATTACGGTTCGAGTGGGACTCACCGAGAAGATAACCACCACCGTCACCAAACGGAGATGCTTGGAGCGTTTCAACTGCTTCAGGAAATGTCTCCTTACGTTAAGTTCAGCCACTTCACTTCTAACCAGGCTATCGTTGAGGCTGTGGCCAATGAGAGAAGGGTTCATATCGTTGATTATGATATTATGGAAGGGATTCAATGGGCCTCACTCATAGAGGCATTCGCCTCAAACAAGAATGGCCTACCGGCGCCTTACCTCCGGATCACAGCGTTGTCACGAACTGGCACCGGAAGGAGATCCATTGCCACTGTGCAAGAGACCGGACGCCGTCTCACTGCTTTTGCAGCCTCCCTTGGCCACCCATTTTCCTTTCATCATTGCAGGTTGGACTCAGATGAAACATTCCGGTCTTCTTCTCTAAAGCTAGTCCGTGGAGAAGCTTTAGTATTCAACTGCATGCTACACTTGCCACACCTCACATACCGTGCACCCAATTCCATTGCATCATTCTTAAACGGTGCAAAGTCATTAAAACCAAAGCTAATAACATTAGCAGAAGAAGAAGTAGTTCCCATTATTAGTCATGAAGCTGGCTTTGTTGGAAGGTTCATGAACTCACTAAACCACTATTCCGCACTTTATGACTCATTGGAGGCTGGGTTTCCAATGCAGAACCGTGCTAGAGCATTAGTGGAACAAGTTTTCTTTGGGCCCCGAATAGCATCTTCGGTGGCTCAGTTATATTGGATGGGGGAAGAAGATGAAGAAAGAGGGTCTTGGGTGAAGTGGTTAGGTGCGGCGGGGTTTAGAGGAGTTCCTATAAGCTCAGCCAATCAATGCCAAGCGAGGTTGTTGTTGGGACTTTTTAATGATGGGTATGGGGTTAAGGAGTTTGAGAGTAATAAGTTGGTGTTGGATTGGAAATCAAGGCGTTTGCTTTCTGTTTCTGTTTGGACGAGTTCTTCAGAATCTGATTCGTAG 1563 0.4862 MSITMNMDIYAINDLDFSEYTTTTSSDTHTSDDGHGYNWNHWSPIVNWDALTGDQNCFHGLIDSLMDDVATAGVNLSPINHQDACNSPSTTSEDITTTTDDITTSACEEEVAAATTGDVDFNGLKLIHLMMAAAEALSGENKSRELARVILVRLKELVSTTHGTNMERLAAYFTEALQGLLDGTGCAHNNKHYNYGSSGTHREDNHHRHQTEMLGAFQLLQEMSPYVKFSHFTSNQAIVEAVANERRVHIVDYDIMEGIQWASLIEAFASNKNGLPAPYLRITALSRTGTGRRSIATVQETGRRLTAFAASLGHPFSFHHCRLDSDETFRSSSLKLVRGEALVFNCMLHLPHLTYRAPNSIASFLNGAKSLKPKLITLAEEEVVPIISHEAGFVGRFMNSLNHYSALYDSLEAGFPMQNRARALVEQVFFGPRIASSVAQLYWMGEEDEERGSWVKWLGAAGFRGVPISSANQCQARLLLGLFNDGYGVKEFESNKLVLDWKSRRLLSVSVWTSSSESDS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1586 520 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 513 IPR005202 -
Lan3g1586 520 PANTHER SCARECROW-LIKE PROTEIN 26 6 513 IPR030028 -
Lan3g1586 520 ProSiteProfiles GRAS family profile. 117 513 IPR005202 -
Lan3g1586 520 Pfam GRAS domain family 126 513 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1586 Lan-Chr3 27491384 27493630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1586 83 516 GRAS Transcription Factor Family AT3G54220 34.404 6.64e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan3g1586 GRAS 1.1e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1586 - - gmx:100787926 634.409