Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1571 ATGTCCGACAAAGAAAACCACGCGCGCCCCCAGCGCGAAGCAAAAAAGAGAGCCGCAGCTGCTATCACCGAACAAAGCAATAGCGGCACTGCCAGGAAGAAAAAGCGCGTCACCTTAAGCGACCTCACCAACCTCCCACCGGATAAACCGGTTTCCGGTTCCGAACTGGGCGGTAACGGCACCGCCACGAAGAGGAAGCGCGTCCCGTTAAGTGAGCTCACCAACTTCCCACTGGATAAACCGGTTCCCGGTTCAGACACCGAGTTCAACCGAGTCAGAAAAAAACCCGCAACTGAACCGGATTATAACTCTGATCCTCAGTTGTGTGTCCCTTATGTTTCTGATATCTACGAGTATCTTCGCAAAATGGAGGTGGATCCAAGTAGAAGACCGTTAGCGGATTATATACAGAAAGTGCAGAGTGATGTGAATGCGAAGATGAGGGGTATTCTGGTAGATTGGTTGGTTGAGGTTGCTGAAGAATATAACCTTGTTTCGGATACTCTTTATTTTTGTGTTTCGTACATAGATAGGTTTTTGTCTCTCAATGCTTTATCTAGAGAGAAATTGCAGTTACTTGGCGTTTCTTCCATGCTACTTGCTTCAAAATATGAGGAAATTAAGCCACCAGAAGTAGAAGATTTTTGTTTCGTTACTGACAATGCATACAGCAAAGAACAGGTTGTGGAGATGGAAGCTGATATATTGAAGACCTTGAAGTTTGAATTAGGTGGTCCTACAGTGAAGACATTTCTAAGAAGATTCTCTAAAGTTGGTCAAGAGAGTAATGATACTTCTAACCTGCAGTTTGAGTTCCTTTGCTACTACCTAGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTCTTGCCTTCTTTGGTGGCTGCATCTGTTGTATTTCTAGCCAGATTTATGTTAAGCCCGACGACACATCCTTGGAATTCAGCGCTTCATCATCTCACCAGATATGAACCTGCTGACTTGAAGGAATGTATTCTAAACATACATGATCTGTACCTTAGTAGGAGAGGGGGCAGTTTCAAAGCTGTGAGAGAGAAATACAAGCAGCATAAGTTCAAATGTGTGGCAACGACACCCTCTCCTCCTGAGATACCTCTTATTTTTGAGTTTCGAGTGACTGACCCTCAGGCACTCGTGAGTCATGACTTGGCTTTTCTTGCTATGGCTTTGGTTTCAACTATTGGCAGAGACATGGAAGACAGGTTTTTGGACACTAGAAGATTGCACTGGCTGGTGCTCATTGTGGCGCTTGCTGTGAAATGCTATTGCACTTGA 1299 0.445 MSDKENHARPQREAKKRAAAAITEQSNSGTARKKKRVTLSDLTNLPPDKPVSGSELGGNGTATKRKRVPLSELTNFPLDKPVPGSDTEFNRVRKKPATEPDYNSDPQLCVPYVSDIYEYLRKMEVDPSRRPLADYIQKVQSDVNAKMRGILVDWLVEVAEEYNLVSDTLYFCVSYIDRFLSLNALSREKLQLLGVSSMLLASKYEEIKPPEVEDFCFVTDNAYSKEQVVEMEADILKTLKFELGGPTVKTFLRRFSKVGQESNDTSNLQFEFLCYYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPTTHPWNSALHHLTRYEPADLKECILNIHDLYLSRRGGSFKAVREKYKQHKFKCVATTPSPPEIPLIFEFRVTDPQALVSHDLAFLAMALVSTIGRDMEDRFLDTRRLHWLVLIVALAVKCYCT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1571 432 CDD CYCLIN 147 236 IPR013763 -
Lan3g1571 432 Gene3D - 129 244 - -
Lan3g1571 432 MobiDBLite consensus disorder prediction 1 89 - -
Lan3g1571 432 SMART cyclin_7 153 237 IPR013763 -
Lan3g1571 432 SMART cyclin_7 250 338 IPR013763 -
Lan3g1571 432 PANTHER CYCLINS 53 376 IPR039361 -
Lan3g1571 432 SUPERFAMILY Cyclin-like 104 243 IPR036915 -
Lan3g1571 432 ProSitePatterns Cyclins signature. 148 179 IPR006671 -
Lan3g1571 432 CDD CYCLIN 246 337 IPR013763 -
Lan3g1571 432 Pfam Cyclin, C-terminal domain 246 368 IPR004367 -
Lan3g1571 432 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 53 376 - -
Lan3g1571 432 MobiDBLite consensus disorder prediction 1 19 - -
Lan3g1571 432 SUPERFAMILY Cyclin-like 246 371 IPR036915 -
Lan3g1571 432 PIRSF Cyclin_A_B_D_E 1 373 IPR039361 -
Lan3g1571 432 Pfam Cyclin, N-terminal domain 115 243 IPR006671 -
Lan3g1571 432 Gene3D - 115 365 - -
Lan3g1571 432 SMART Cyclin_C_2 246 369 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1571 Lan-Chr3 27303215 27306547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1571 1 381 Core Cell Cycle Gene Families AT1G47210 53.333 2.88e-139 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1571 K06627 - gmx:100801988 514.612