Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1569 ATGGATCGGATTAAAGGACCATGGAGCCCCGAAGAGGACGAAGCGTTACAAAAGCTGGTTGAGACCCACGGTCCAAGAAACTGGTCTTTGATAAGCAAATCCATTCCTGGTCGATCCGGGAAATCGTGCCGTCTACGGTGGTGCAATCAGCTGTCTCCGGAGGTAGAGCACCGTCCATTCTCGCCGGAGGAGGATGACGCCATCATCAGGGCCCACTCTATGTTCGGTAACAAATGGGCAACAATAGCCCGCTTACTTAACGGCCGAACTGATAACGCCGTTAAGAATCACTGGAACTCCACCCTTAAAAGAAAATGCTCCGCCGTTATCGTCTCCGATCCCGATTCCCCTCCTCTTAAAAGATCCGCTAGCCTCGGAGCGGGTACAACAATTTCGGGTTTATTTTTGAACCCGGAAAGCCCATCCGGGTCCGGGTTCAGCGATCCAGGTTTACCAGCTATCCCAACTCCTCAAACAAAAAACGATGTGTCTTCTACTATGGATCCACCAACTTTGCTTACCTTGTCCCTTCCCGGGTCGGGTTCTAGTAATAACGGGTCCGGATCCGGGTCGAAGCAGACTCCAAATTCTAGCCCTACCCAATTTATCCCATCGGTGCCGGAGAAGCAATTATTCAACGAGGAGTTTTTGGCAGTGATGCAAGAGATGATTAGAGATGAAGTAAGGAGTTACATGTCTGGGATTGAAGTGCAGGGTGGGATGTGTGTGCAACAAACCGAAGCAATTAGAAACGCTGTGGTGAAACGTATGGGAGTTAGTAACGTCAAGTAG 792 0.5 MDRIKGPWSPEEDEALQKLVETHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFSPEEDDAIIRAHSMFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSAVIVSDPDSPPLKRSASLGAGTTISGLFLNPESPSGSGFSDPGLPAIPTPQTKNDVSSTMDPPTLLTLSLPGSGSSNNGSGSGSKQTPNSSPTQFIPSVPEKQLFNEEFLAVMQEMIRDEVRSYMSGIEVQGGMCVQQTEAIRNAVVKRMGVSNVK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1569 263 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Lan3g1569 263 CDD SANT 7 49 IPR001005 -
Lan3g1569 263 Gene3D - 58 116 - -
Lan3g1569 263 Gene3D - 4 56 - -
Lan3g1569 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Lan3g1569 263 PANTHER MYB PROTEIN-RELATED 1 232 - -
Lan3g1569 263 MobiDBLite consensus disorder prediction 157 204 - -
Lan3g1569 263 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 1 232 - -
Lan3g1569 263 SUPERFAMILY Homeodomain-like 2 98 IPR009057 -
Lan3g1569 263 MobiDBLite consensus disorder prediction 134 204 - -
Lan3g1569 263 CDD SANT 59 102 IPR001005 -
Lan3g1569 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 106 IPR017930 -
Lan3g1569 263 ProSiteProfiles Myb-like domain profile. 1 51 IPR001005 -
Lan3g1569 263 Pfam Myb-like DNA-binding domain 8 65 - -
Lan3g1569 263 SMART sant 4 53 IPR001005 -
Lan3g1569 263 SMART sant 56 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1569 Lan-Chr3 27234933 27236020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1569 1 236 MYB Transcription Factor Family AT4G37260 53.333 3.74e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan3g1569 Myb_DNA-bind_6 5.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1569 K09422 - pvy:116130840 327.405