Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1556 ATGGGTTATTTCTCTTGCAATGCCGAATCTGCAATCGCCACCTGCGATCCCCATTACTGGGATCTCAAGAAAACCACCACCAACAACACCACCACACGCACTATCAGAAAATTCCACTACACCGACCTCGTCACCGCCACCAACTCCTTCTCCGACCAAAACTTCTTAGGCAAAGGCAGCCACGGCAGCGTCTACAAAGCCACCCTCGACGGCGGCAAGCTCATCGCCGCCGTCAAAACAACAAAACTCACCACCAAAACAACAACCTCCCGCCACCACCACCGCCGCCACATCACCACCCCCGCAGAAAACGAGATCGAGATTCTCTCTCATGTAAACAGCACTAGAATGGTGAACCTTATCGGTTTCTCCACTGATCCAAACGACAACAAATTAATCGTCGTTCAGTACATGCCGAACGGTTCACTACATGATTTACTTCATTCTCCGGTTGGACCACCCGGTTGGACCGAACGAATCCGGTTCGCTCATCAAGTAGCGAAAGCGGTTCACACTCTTCACTCTTCTAACCCTCCAATAATCCATAGAGACATTAAATCTTCCAACGTTTTAATCGACTACGATAGAAACGCGAGACTCGGTGATTTTGGACTTTCACTAAGGGGACACGTGGAGGACGTTCTTGTTAAGTGCACGCCACCGGCGGGGACGTTAGGTTATCTCGATCCATGCTATCTTGCGCCGGAGGATCTCTGCGCCAAAACCGATGTATTCAGTTTCGGGATTTTGTTGTTAGAGATTGTAAGTGGAAGGAATGCTATTGATTTGAATTACAGTCCTCCGTCGGTGGTGGACTGGGCGGTGCCGTTGATCAAGCGCGGCCAGTTCGGCGATATATGTGACCGGCGGATTGGAGTTCCGGCGGATGAGGCGGTTGTGAGGCAGCTGGCGGTTTTGGCGGGGAGGTGCGTGAGGTCGACGGCGGAGAGGAGGCCGTCGATGGAGGAGGTTGTGGAGGGGGTTAAGAATGTGAGGAAGAGGATTGGTGCGGCGGCCATGTGGAATGGGTTGAGTAGGCGCGTGGCGCGTGATAGGTTTGGGGTGTTTGAATGTGGTGATGTTGATAGGAGTGAAGAAGTTGTGAGAGTAGTGAAGGGTGGGAGTAGAAGAAGGAATGGGAAAGTATCCAGTGTGGGAGGTGTAGAGTATCAGATTGGACCTTCTTCCAATCAAGTGAGTCGAGTTGTTAGGTGTAAGTCCATTGGTTCTGGTTCTATAATGAAATTGGGTTCGGATCATAATGCCGATGGGAAACCGACCCGAATTGAGATAAAGGGTAACATGAGGCTGAAGAAATCTAAGTCTATGGATTTTTCGCAAGGTACTACTACCCTTTTACATTATGGTAGTGAGAATAAATATAAGAGTGGCCCCATTCATTCAATAGAGACTGCAATGTCCAAGTTGGTCATTAAGCATAAGTTGGAAGAGAAAATGCTTGAAGCACCACTAGTTAGGAATTTGAGTAACCCAGAATAA 1500 0.492 MGYFSCNAESAIATCDPHYWDLKKTTTNNTTTRTIRKFHYTDLVTATNSFSDQNFLGKGSHGSVYKATLDGGKLIAAVKTTKLTTKTTTSRHHHRRHITTPAENEIEILSHVNSTRMVNLIGFSTDPNDNKLIVVQYMPNGSLHDLLHSPVGPPGWTERIRFAHQVAKAVHTLHSSNPPIIHRDIKSSNVLIDYDRNARLGDFGLSLRGHVEDVLVKCTPPAGTLGYLDPCYLAPEDLCAKTDVFSFGILLLEIVSGRNAIDLNYSPPSVVDWAVPLIKRGQFGDICDRRIGVPADEAVVRQLAVLAGRCVRSTAERRPSMEEVVEGVKNVRKRIGAAAMWNGLSRRVARDRFGVFECGDVDRSEEVVRVVKGGSRRRNGKVSSVGGVEYQIGPSSNQVSRVVRCKSIGSGSIMKLGSDHNADGKPTRIEIKGNMRLKKSKSMDFSQGTTTLLHYGSENKYKSGPIHSIETAMSKLVIKHKLEEKMLEAPLVRNLSNPE* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1556 499 Pfam Protein kinase domain 52 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1556 499 PANTHER - 1 480 - -
Lan3g1556 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lan3g1556 499 PANTHER OS01G0750732 PROTEIN 1 480 - -
Lan3g1556 499 Gene3D Phosphorylase Kinase; domain 1 19 137 - -
Lan3g1556 499 SUPERFAMILY Protein kinase-like (PK-like) 26 326 IPR011009 -
Lan3g1556 499 SMART serkin_6 50 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1556 499 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Lan3g1556 499 ProSiteProfiles Protein kinase domain profile. 50 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1556 499 Gene3D Transferase(Phosphotransferase) domain 1 138 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1556 Lan-Chr3 27027972 27029895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1556 33 335 Receptor kinase-like Gene Family AT3G59420 37.987 1.01e-60 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan3g1556 Pkinase 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1556 - - gmx:100799382 533.872