Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1554 ATGGCACCCAGTTTTGACTGTGTTTCAAGCCTTCTCTGTTCAGAAGACAGAGACAGTGTTTTCGATGAAAACTCTTCTGTGTACGAGGACACATGTCAGCATCTTAGGAACCATAAAAAACATCACTTTGGTGAGTCAAATATGTTGCCATTGCAGGATGATGAGTGTTTTGCGACAATGGTTGAAAAGGAATGCCAGCACTGGCCTGGTGTTGTTTACTTGAATAGAATGTACAATGGGGATTTGGATTTTGGTGCAAGAAAAGAGGCTGTTGATTGGATTGAAATGGTACGAGCACAGTTTGGTTTTGGACCTCTTTGTGTATATCTATCAATAAATTACTTGGATCGATTCCTTTCTGCGTATCAATTACCGGGAAGAGATTGGGCAATGCAATTGCTGGCTGTGGCATGCTTGTCTCTGGCTGCTAAAATTGATGAATGTGATGTTCCAATGATTGTTGATTTGCAGTTCGGTGAATCCAAGTTTGTGTTCGAAGCTAAAGCCATACAAAGAATGGAGCTTCTTGTGCTGAGCACATTGAATTGGAGAATGCAATCAATTACTCCCTTTTCATTCATTGATCTTTTCCTTTACAAGATCAATGATGATCAAAGTCAATTAAGATCTTCAATTTTGCAATCTACCCAACTTATACTCAGCACTGCAAGAGGGATCGACTTCTTGGAATTCAAACCATCAGAGATCGCAGCAGCTGTGGCTATATCTGTTGTCGGGGAAACCAAAACTATTGACGCTAGGAAAGCAATCTTTGTTCTGATTCCGCAGGCTGAAGAGGAGAGAGTCTTGAAGTGTGTTAAAATGGTCCATGAACTATCACTAAACAATGGCATCTACAAGGATTATTCAAGTGCTATTGTACCTTGTATGTCCCAAAGTTCAATAGGGGTATTAGATACTTCAAGTGATTACACAAATGCTGATTCATGTGCAAATTCTTCACATAATAGCTCTGATACTAAAAGGAGGAAGCTAAACAACACATATGGATCATAG 1017 0.3972 MAPSFDCVSSLLCSEDRDSVFDENSSVYEDTCQHLRNHKKHHFGESNMLPLQDDECFATMVEKECQHWPGVVYLNRMYNGDLDFGARKEAVDWIEMVRAQFGFGPLCVYLSINYLDRFLSAYQLPGRDWAMQLLAVACLSLAAKIDECDVPMIVDLQFGESKFVFEAKAIQRMELLVLSTLNWRMQSITPFSFIDLFLYKINDDQSQLRSSILQSTQLILSTARGIDFLEFKPSEIAAAVAISVVGETKTIDARKAIFVLIPQAEEERVLKCVKMVHELSLNNGIYKDYSSAIVPCMSQSSIGVLDTSSDYTNADSCANSSHNSSDTKRRKLNNTYGS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1554 338 Gene3D - 70 186 - -
Lan3g1554 338 SUPERFAMILY Cyclin-like 47 185 IPR036915 -
Lan3g1554 338 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
Lan3g1554 338 Gene3D - 59 274 - -
Lan3g1554 338 CDD CYCLIN 87 178 IPR013763 -
Lan3g1554 338 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 333 - -
Lan3g1554 338 SMART Cyclin_C_2 188 303 IPR004367 -
Lan3g1554 338 Pfam Cyclin, C-terminal domain 188 291 IPR004367 -
Lan3g1554 338 Pfam Cyclin, N-terminal domain 56 185 IPR006671 -
Lan3g1554 338 PANTHER CYCLINS 1 333 IPR039361 -
Lan3g1554 338 SMART cyclin_7 92 179 IPR013763 -
Lan3g1554 338 SUPERFAMILY Cyclin-like 171 299 IPR036915 -
Lan3g1554 338 MobiDBLite consensus disorder prediction 315 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1554 Lan-Chr3 27009502 27011907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1554 39 318 Core Cell Cycle Gene Families AT2G22490 43.333 2.42e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1554 K18810 - gmx:547739 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0885 15 18137955 18140710 Lan3g1554 3 27009502 27011907 LSH
Lan14g0684 14 13800443 13803022 Lan3g1554 3 27009502 27011907 LSH