Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1546 ATGCAGTTCCCAAACAGAGCAGAAGCAGAACGGTTACTAGGGATAGCGGAAAAGCTATTACAGAACCGCGATCTAACCGGTTCAAAAGATTTCGCAATTCTAGCTCAAGAAACCGAACCGCTTCTAGAAGGTTCTGACCAGATTCTCGCAATCGCCGATGTTCTCATCGCCGCGGAGAAACCGCTGAACAATAACCTCGATTGGTACTCCATTCTTCAAGTAGATCGAAGGTGCCAAGACATGGATCTGATGAAGAAGAATTATCGAAGGTTGGCTCTTCTACTTCACCCTGATAAGAACCCTTTCACTCTCGCTGAACACGCTTTTAAGCTTGTTTCTGATGCTTGGGTTCTTTTATCTGACCCGGTTCAGAAACCGCTCTATGATCAGAACATAGCTATTCCGGTTCAGCAACAAGATAAGTTACCGGTTCGGAGAGGTAACAGTTACGGTTACAGTAACAATAGCAGTAGTAATTTTTGGACTGCTTGTCCGTACTGTTATTACATGTATGAGTATCATAGGGGTTATGAGGGTTGTTGTTTGAGGTGTCAGAATTGTGAGAAGTCGTTTCACGGTGTCGCGGTTCCGTCGCTGCCACCACTTGTGCCCGGGCAGGAGGCTTATTATTGTAGTTGGGGGTTTTTTCCTATGGGGTTTGTGTTTGGGACTCCGGGTTCTGAAGCTAAGGGGGCTTTACCGTTACCAAATCTGAGCCCAGCTGAGGTTCCTAATTGGAACCAGCAGCCGTGGTCACAGCCGCAACAACAACAACAGTTGCAGCCGCAGCCGTGGCCGCAGAATCAGCCACAGACTCAGCAAGAGCCGCAGCCGCGTTATGAACCAGTTGAACTTGTGGATGATAACAATGGTTGGAATTTTGCGGAGCCTGTGATGAGGGTCAGTGGTGGTGGTGGTGGTATTTCGAATGGCATTGGTTTGGGAATGGGATCAGGTGCGAAGAAGCGAGGGAGGCCGAGGAAAGTGGTTTGA 993 0.4844 MQFPNRAEAERLLGIAEKLLQNRDLTGSKDFAILAQETEPLLEGSDQILAIADVLIAAEKPLNNNLDWYSILQVDRRCQDMDLMKKNYRRLALLLHPDKNPFTLAEHAFKLVSDAWVLLSDPVQKPLYDQNIAIPVQQQDKLPVRRGNSYGYSNNSSSNFWTACPYCYYMYEYHRGYEGCCLRCQNCEKSFHGVAVPSLPPLVPGQEAYYCSWGFFPMGFVFGTPGSEAKGALPLPNLSPAEVPNWNQQPWSQPQQQQQLQPQPWPQNQPQTQQEPQPRYEPVELVDDNNGWNFAEPVMRVSGGGGGISNGIGLGMGSGAKKRGRPRKVV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1546 330 MobiDBLite consensus disorder prediction 241 278 - -
Lan3g1546 330 MobiDBLite consensus disorder prediction 233 330 - -
Lan3g1546 330 Gene3D DnaJ domain 56 155 IPR036869 -
Lan3g1546 330 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 272 - -
Lan3g1546 330 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 272 - -
Lan3g1546 330 CDD DnaJ 67 121 IPR001623 -
Lan3g1546 330 SMART dnaj_3 66 124 IPR001623 -
Lan3g1546 330 SUPERFAMILY Chaperone J-domain 64 152 IPR036869 -
Lan3g1546 330 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Lan3g1546 330 Pfam DnaJ domain 67 129 IPR001623 -
Lan3g1546 330 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lan3g1546 330 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lan3g1546 330 PRINTS DnaJ domain signature 104 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1546 Lan-Chr3 26947707 26949061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1546 4 246 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 53.226 4.18e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1546 - - lang:109344257 581.637