Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1543 ATGCGCACATTACATGCCACTTTCTTCCTCTCACTCTTTACTCTCTCTCTCTCTACTGTGATAAAAGAGAAAAAAAACCGTCTTTTTTTGGGAAGAATCATGAGAGAAGAAGAAGAAGAACACGAGGGTTGTGCAAAGGAATTTCCCTTCTCAGATTTGCTTCTTGACCGTGAAAAATGTACCATGATGAGCTTGCAAGACAAACAAAAACTAGTCCATAAGATTGCTCAACAGTCAAAAGATGCCTCAAATATGCTTCATTCCTTTACTCGCAGGGAGCTTCTAGAAATAATCTGCGCTGAATTAGGTGCAAAGAGAAAGTACACGGGATATACAAAGGGCCAAATGATAGAAAATCTTCTCAAGATAATTTCGAAGGAATCCAAGTTGAACAGCATCAAAAGGACCATTGCCCATCCTCCTGCCAAAAGTCACATTGGACCTAAGAGGAAAAAAGTTGCATCTCATGATTTACATTACGCTCCTCAGGAGAATAGTAAGGAGGGAACTGCGAAAGCCTTGCTGTGTCAGAATGTTGCATGCAGAGCAACATTGACTTCAGAAGATTCCTTTTGCAAGAGATGTTCTTGTTGTATTTGTCTTTGTTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCCGATCTTCCTGGTGAGGAGTCATGTGGAAGGTCATGCCATTTGCAATGTGCTTTGAGTAATGAAAGCTCCGGCATTTTGAAGGACAGTTGGGGTACAAAGTTGGATGGAAGTTTTTTGTGTGCTTGTGGAAAAAATAATGAATTAATGAGCACATGGCGAAAACAGTTATTGGCTGCCAAAGAAGCCAGGAGAGTGGATATACTCTCTTTACGAGTATCCTTGGCTCGCAGAATTCTCATAGGAACCGAAGTATACATTGAAGTTCATAAGATTGTAGAAAGTGCCCTCGAGTTACTGAACAATGAGGTTGGACCTCTGGATCAAGAATGTGCACGAATGACACGTGGAATTGTGAGCAGACTTTCATGTGGTGCTGAGGTTCAGAAGTTGTGTTATAATGCACTCGAATGTTTTGATTCAAAGTTTTCTAATCTTTTCTCTGATGGTACTGGAAATAAAAATACACCAGCATGCTCTATACGTTTTGAAGAGTGCCTTCCTACCTCGGTGATCATTGTGCTAGATTATAAAGATCACCATTTAAAGAAATTTTTAGGATGCAGGCTTTGGCACCGGATATCAACAACAAACTACCCTGAACAACCTACCTTCATTGTTTTGAGGCCAGAGAAAAGGTTCAAGTTAGAAAACCTCCATCCTTCTACCGAGTACTTTTGCAAGGCTTCTCTGTTTAGCAGCACTGGGGTTTTGAGTGTCGCAGAAGCTAAATGGGTTACACCTTCTAAGCCCATGGCTTCTTCAAAAGTTACTACTCCTTCACCTCATAAATCCTCAGTTACAACCATGCATATGTGTGAATATCACATGAATAAGATAAATACCGAAAAACATTATCAATTGGAATCTGCCAACTCGGACATGAAGCTATCATCCAGAAGACATCTCATCTTGGACAACAGCAAGAGCAGTTTCGAAGAGTTTCTAGCCAGGTCTCCATCTGTTGAATCCCTTTCATGTAAAACTTTTGCTGCGGTTTCGCCTACCACACCTTCTAAATCCAATGAGATGAGACAAAGTAATGGTTTTACTTCTAAGAAGCACGGGGAGGAAAACGATTACGAGTATTCTGTCAGGGTGGTCAAATGTCTAGAACATGAAGGGCACATAGCCGAAATCTTCAGAATAAAATTTCTCACTTGGTTCAGCCTTAAAGCATCCCAGCAAGAGAGAAGGGTTGTTAGTGCTTTTGTGGACGCGTTGAATGACGACCCTGCAAGCTTAGCGGACCAGCTGATACACACTTTCACAGACGAGATATTTCGTGAGCAAAAATCTCACTGA 1953 0.4122 MRTLHATFFLSLFTLSLSTVIKEKKNRLFLGRIMREEEEEHEGCAKEFPFSDLLLDREKCTMMSLQDKQKLVHKIAQQSKDASNMLHSFTRRELLEIICAELGAKRKYTGYTKGQMIENLLKIISKESKLNSIKRTIAHPPAKSHIGPKRKKVASHDLHYAPQENSKEGTAKALLCQNVACRATLTSEDSFCKRCSCCICLCYDDNKDPSLWLTCSSDLPGEESCGRSCHLQCALSNESSGILKDSWGTKLDGSFLCACGKNNELMSTWRKQLLAAKEARRVDILSLRVSLARRILIGTEVYIEVHKIVESALELLNNEVGPLDQECARMTRGIVSRLSCGAEVQKLCYNALECFDSKFSNLFSDGTGNKNTPACSIRFEECLPTSVIIVLDYKDHHLKKFLGCRLWHRISTTNYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGVLSVAEAKWVTPSKPMASSKVTTPSPHKSSVTTMHMCEYHMNKINTEKHYQLESANSDMKLSSRRHLILDNSKSSFEEFLARSPSVESLSCKTFAAVSPTTPSKSNEMRQSNGFTSKKHGEENDYEYSVRVVKCLEHEGHIAEIFRIKFLTWFSLKASQQERRVVSAFVDALNDDPASLADQLIHTFTDEIFREQKSH* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1543 650 Pfam PHD - plant homeodomain finger protein 176 293 IPR032881 -
Lan3g1543 650 MobiDBLite consensus disorder prediction 552 571 - -
Lan3g1543 650 PANTHER OS08G0220600 PROTEIN 47 649 - -
Lan3g1543 650 PANTHER VIN3-LIKE PROTEIN 2-RELATED 47 649 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1543 Lan-Chr3 26913304 26917896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1543 59 649 PHD Gene Family AT5G57380 33.386 1.55e-101 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1543 - - lang:109344253 1288.86