Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1525 ATGGCGATCGCAACAGAGACACAACAACCTCAATCTCAACAACACAAGGATGTTTCAGCTGGAGATCAAAAAAGGTGGACCCTCAATGATTTTGATATTGGAAAACCTCTTGGAAGGGGGAAATTTGGCCATGTCTATCTTGCTAGAGAAAAGATAAGTAACCATATTGTTGCGCTGAAAGTGCTCTTCAAGAGCCAATTGCAACAATCACAAGTTGAGCATCAGCTTCGTAGAGAAGTTGAAATTCAAAGTCATCTCCGACACCCCCACATTTTACGCCTTTATGGATATTTTTATGATCAGAAAAGAGTTTATTTGATTTTGGAGTATGCGCCTAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAACATTTCAGTGAAAGACGTGCAGCCACTTATGTTGCATCACTGGCACGGGCCCTTATATATTGTCATGGCAAGCATGTAATACACAGGGACATCAAACCAGAGAACCTTCTAATTGGTGCACAGGGCGAGCTAAAGATAGCTGACTTTGGATGGTCAGTTCACACATTCAATCGCAGGCGGACCATGTGTGGAACACTGGATTACCTCCCTCCCGAGATGGTGGAGAGTACAGAACATGACGCGAGTGTGGATATCTGGAGCCTTGGTATTCTGTGTTACGAGTTTCTTTATGGAGTTCCGCCTTTTGAGGCAAAAGAACATTCTGATACATATAGGAGGATCGTACAAGTGGATCTCAAGTTTCCTCCTAAACCAATTGTGTCTTCTGCGGCAAAGGACCTCATCAGTCAGATGCTGGTCAAGGATTCTACTCAGCGTCTACCGCTGCACAAGCTTCTTGAACATCCTTGGATTGTTCAGAATGCAGAGCCCTCGGGTGTATATAGGAGCTAG 885 0.4384 MAIATETQQPQSQQHKDVSAGDQKRWTLNDFDIGKPLGRGKFGHVYLAREKISNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKHFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESTEHDASVDIWSLGILCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSTQRLPLHKLLEHPWIVQNAEPSGVYRS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1525 294 ProSiteProfiles Protein kinase domain profile. 31 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1525 294 MobiDBLite consensus disorder prediction 1 17 - -
Lan3g1525 294 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 293 IPR030616 GO:0004672
Lan3g1525 294 PIRSF ILK 2 279 - -
Lan3g1525 294 MobiDBLite consensus disorder prediction 1 20 - -
Lan3g1525 294 Pfam Protein kinase domain 33 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1525 294 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Lan3g1525 294 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Lan3g1525 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Lan3g1525 294 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
Lan3g1525 294 CDD STKc_Aurora 30 283 - -
Lan3g1525 294 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 293 - -
Lan3g1525 294 SMART serkin_6 31 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1525 294 Gene3D Transferase(Phosphotransferase) domain 1 115 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1525 Lan-Chr3 26698736 26701876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1525 22 293 CBL-interacting serine-threonine protein kinases AT5G10930 34.409 6.98e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lan3g1525 Pkinase 2.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1525 K08850 - gmx:100803678 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0730 14 14276764 14281112 Lan3g1525 3 26698736 26701876 LSH