Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1518 ATGGATGAGTTCGATAGTGGTGGCCGGAGCGCCGATAAGGCTCCCGGAGCTGAAGATGAGGGCAGTACTGCTCCACTTCCGGAGAAGGTCCAGGTTGGCGGTTCTCCGTTATACCGAGTTGACAGGAGGCTTGGAAAGGGAGGATTTGGACAAGTCTATGTTGGTCGCCGAATGGGAGCTGGTGCCGGAGCTATTGAGGTAGCTTTAAAATTTGAGCATAAAAGCAGCAAAGGATGCAATTATGGACCTCCTTATGAGTGGCAGGTTTACAATGCATTAGGAGGTAGTCATGGTGTTCCTCGAGTTCATTACAAGGGAAGGCAAGCGGACTACTATATTATGGTCATGGATATGCTTGGCCCTAGTCTATGGGATGTTTGGAATAATAACTCACACATGATGTCTACTGAAATGGTGGCATGTATTGCAATTGAAGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCACCCCAGGAACTCCTGATGAAAAGAAGTTATTTTTGGTTGATCTTGGATTAGCAACTCGGTGGCGTGATAGTTCAAGTGGCCTTCATGTTGATTATGATCAACGTCCAGATGTATTTAGGGGTACAGTTCGTTATGCTAGCGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCTTACACACTTGTCTTCCTTCTTCGTGGTCGGCTACCTTGGCAAGGATATCAGGGGGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAGATGGCCACTTCTCCCGAAACTTTGTGCTGTCTTTGCCCTCAACCTTTCCGGCAGTTTCTCGAGTATGTGGTGAATTTGAAGTTTGATGAAGAGCCAAATTATGCAAAGTACATATCGCTTTTTGATGGAATTGTTGGTCCAAATCCTGACATCAGACCTATAAACACTGAGGGTGCTCAGAAGCTTATATGTCAAGTTGGACAGAAGAGAGGGCGATTGACTATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACGCAGTGGATTAGTATTTACAATGCTCGCCGACCAATGAAGCAAAGGTATCACTACAATGTTGCTGATGTGAGACTCTCCCAACACATTGACAAGGGAAATGAGGATGGATTATTTATCAGCAGTGTGGCTTCTTGTACTAATCTTTGGGCACTAATTATGGATGCTGGCACTGGATTCACTTCACAAGTTTATGAACTCTCACCCCACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTATTACATTAGTGCCTTAGCTGGAGCTAATAATGGGAGCTCATTGGTCGTAATGTCTAAAGGGACCCAGTACTTACAGCAATCCTATAAAGTCAGTGATTCATTTCCATTCAAGTGGATTAACAAAAAGTGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCTGGAAATAGATGGGCAATTGTTATGTCCCGTGGAGCTGGATTCTCAGACCAGGTTGTGGAACTTGATTTCCTTTATCCCAGTGAAGGTATTCATCGGAGGTGGGATAATGGTTACCGAATCACCTCAACTGCTGCAACATGGGACCAAGCTGCTCTTGTTCTCAGTATCCCAAGAAGAAAACCAGCAGATGAAACCCAAGAGACACTTCGCACATCTGCTTTTCCTAGTACTCATGTCAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTACGGGAGAACAGTGTCATGA 1797 0.4407 MDEFDSGGRSADKAPGAEDEGSTAPLPEKVQVGGSPLYRVDRRLGKGGFGQVYVGRRMGAGAGAIEVALKFEHKSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQADYYIMVMDMLGPSLWDVWNNNSHMMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGTPGTPDEKKLFLVDLGLATRWRDSSSGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCLCPQPFRQFLEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGQKRGRLTMEEDDDEQPKKKVRMGMPATQWISIYNARRPMKQRYHYNVADVRLSQHIDKGNEDGLFISSVASCTNLWALIMDAGTGFTSQVYELSPHFLHKEWIMEQWEKNYYISALAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGNRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAALVLSIPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1518 598 Pfam Protein kinase domain 38 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1518 598 ProSitePatterns Protein kinases ATP-binding region signature. 44 70 IPR017441 GO:0005524
Lan3g1518 598 ProSiteProfiles Protein kinase domain profile. 38 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1518 598 CDD STKc_CK1 38 307 - -
Lan3g1518 598 Gene3D Transferase(Phosphotransferase) domain 1 11 355 - -
Lan3g1518 598 PANTHER - 15 571 - -
Lan3g1518 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Lan3g1518 598 MobiDBLite consensus disorder prediction 1 32 - -
Lan3g1518 598 PANTHER CASEIN KINASE-RELATED 15 571 - -
Lan3g1518 598 SUPERFAMILY Protein kinase-like (PK-like) 38 311 IPR011009 -
Lan3g1518 598 MobiDBLite consensus disorder prediction 1 16 - -
Lan3g1518 598 SMART serkin_6 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1518 Lan-Chr3 26645978 26650733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1518 32 265 AGC Kinase Gene Family AT3G08730 22.034 1.59e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lan3g1518 Pkinase 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1518 - - gmx:100800125 1187.56