Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1503 ATGGAAAGTGACAGGAAAGTCCCTGCTCAGTCGAGTGGTGGTGTTCAGAAAGGCAAAGCATTGCATGGGAGGACTACTGGCCCTACAAGGCGTTCTACAAAAGGACAATGGACACCTGAGGAGGATGAGATTTTGTCCCAGGCAGTACAGCGATTTAAAGGAAAGAATTGGAAAAAAATAGCCGAGTGTTTCAAGGATAGAACTGATGTGCAATGCTTGCATCGGTGGCAGAAAGTCTTAAATCCAGAACTTGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATTATTGCTTTGGTGAACAAATATGGTCCTAAAAAGTGGTCTAATATTGCACAGCATTTACCTGGGCGTATTGGTAAGCAGTGTCGAGAAAGGTGGCATAATCATCTTAATCCGTCTATAAACAAGGAAGCGTGGACGCAAGACGAGGAGTTGGCTCTAATAATTGCTCATGAAAAATATGGGAACAAATGGGCTGAGCTAACAAAATATTTGCCCGGAAGGACAGACAATGCAATAAAAAATCACTGGAACAGTTCTGTGAAAAAGAAATTGGATTCTTACAAGGCATCAGGCTTGCTTGCTCGATTACAATCTTCAAGATTGCAGTCTAGTGGTGATGAGAATGGTCCCAGGGGGACTGAAGGAGGAGAAGTTTCACAGTGTAGCCAGGAGTCAGTTAATGCCGGTCACTTTCCTTCTGCCACTGAAATGAGCAACGCTGTTTTTCAAACTAGAGAGAAAAACAGGCCAAATGAAGAATCTAGTCTAGGAAAGGATTTTAGTCCTAGTCAAGCATCCTGTTCTGAGCCGTATTACGTGTCTCTAGATGATGTTGAATTCATTGAGCAGAAATATGTACAAGAATCTGGAAATTTCACAAATGAGGACTGCCAGCTTAATTTACATGCCCTAACCGATATTTCCTCATTGGACTTTGTGCGTGAATCCTCAAGGTTGCAAAATGATTGTATAGCTCCAAGTGAAAGCCGTGACATGCTGATATCTAATGACGAATGCTGCCGATTGCTATTTTCAGAGGCATTGAGTGATGAATGCTTTTCCTCTGGAGATAATAAAGGTCTAAATATGGCTGACCTGTCTAGATGCACTTCGTTTAGCTGCCAGACATCTGCTGCTCCATCAGTATCTTCTGCTAGTGATGATAGGTTGTTATATACTGCTGAAGCCAATGAGTTAGTTGGATCTGTGGATCAGCAGTTTGTCTGCCCGACATCTGCTCCACCAGTACCTTCTGCTAGTGATGGTAGGTTGCTGTATATTGGGTATGAGGATCAGCAGTTTGTCTCCAGATCAGAGGACAACATCCTTTATGCCAATGACTTATCTAGTTCTCCAGGTATCAATGAGATAGGTCGTGCAGAATTGCAAGAGCCAACAGATAATGTTGAGGATACCTCAAAATTGGTCCTTGTAAATAGTATTGGCTCTGGTTCAGATGCTAAACAAACTTGCTATCCAGCAGATGGAAAGCCAAATGTGCATACAGAACCAGAGAACACAGGATCTCTATGTTACAAGCCTCCCTGTTTTCCAAGCTTGGATATTCCTTTCTTAAGTTGTGATCTTATACAACCTGGGGGTGATATGCAGCAAGAGTTTAGTCCCCTAGGTATCCGCCAGTTGATGATGTCTTCTATGAACTGTCTATCTCCTTTTAGGTTGTGGGACTCACCTTCTCGAAATGATAGTCCAGATGCTTTGTTGAAAAGTGCTGCTAAAACTTTTATAGGTACACCATCCATATTAAAGAAAAGACACCGAGGCCTTTTATCTCCGCTATCAGATAAAAGAATTGAGAAGAAACTTGACTTTGACATGGCATCATCATTGATAAAAGATTTTTCCTGTTTGGAAGTCATGTTTGACAATGTTGAGACTCAGGAAGCAGTTTTGCCTTCTCCATCTTCAATGGGGAAAAAGAACTCTGGTACCTCTGTTGAAGATGATAAAGAAAATTGTGGACAAGTTGTTAAAGAGGAACAAGTATTGGAGAAAAATAATTCTGCAATTTCGGATGACAAAAGGTCAGAACTAGATACAGGTGATAGTAATTCTCAAGAGAAGAGTACACAGTCAGTTTCTGATGTTAAGTCTGAGATAAAAAATGACGTCAATGCGACTGCTGAGATTGTGCAACAACCTTCTGGAGTTCTGGTTAAGCATGATAGGAATAACCTGTTACTGCACTCTCCTGATCTAGTTGGTTTTAAATCAGACAGCGATCATAGTTTATGTGCGAGAGCTCATAAAAGTCCATGCTCGGGTGTTAAGTCTCCTTATGGACAGGAAAAACTTAGAGTTGCTGTTGCTAGTTGTGTACAATCTTTCTGTTCATCAGCCCAGGGGGAGAATTCAGATATTCATGCTGGAAAAGATGGTGGTTTTGAAACATGTGGCATATTTGGTGGAACACCTTTTAGGAGAAGTATTGAGTCACCTACAACATGGAAATCACCTTGGCTCTTCAACACTTTTCTGTCTAGCCCCAAGATTGATACTGAAATTACTATTGAGGATTTTGGGTATTTCATGAGCCCGGGTAATAGGAGCTATGATGCAATCGAGTGGATGAAACAGATCAGCCCAATTGCTCGTGAGATTTTGGAAAATGAAACTCCTAAGGCATCACAAAAAAATGAATCTGGAAATGACAGTGATGGGGACCACAAAAATAATGATCCTTGTGATCGGCCCGGGAACCATTGTCAGTTGGCTTCAAATGCTATCTTAAAGGTGGAGCGACGTATACTTGACTTCAGCGAATGTGGAACACCAGGCAAGAAGCTGCCTCTGTAG 2826 0.4158 MESDRKVPAQSSGGVQKGKALHGRTTGPTRRSTKGQWTPEEDEILSQAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIALVNKYGPKKWSNIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQDEELALIIAHEKYGNKWAELTKYLPGRTDNAIKNHWNSSVKKKLDSYKASGLLARLQSSRLQSSGDENGPRGTEGGEVSQCSQESVNAGHFPSATEMSNAVFQTREKNRPNEESSLGKDFSPSQASCSEPYYVSLDDVEFIEQKYVQESGNFTNEDCQLNLHALTDISSLDFVRESSRLQNDCIAPSESRDMLISNDECCRLLFSEALSDECFSSGDNKGLNMADLSRCTSFSCQTSAAPSVSSASDDRLLYTAEANELVGSVDQQFVCPTSAPPVPSASDGRLLYIGYEDQQFVSRSEDNILYANDLSSSPGINEIGRAELQEPTDNVEDTSKLVLVNSIGSGSDAKQTCYPADGKPNVHTEPENTGSLCYKPPCFPSLDIPFLSCDLIQPGGDMQQEFSPLGIRQLMMSSMNCLSPFRLWDSPSRNDSPDALLKSAAKTFIGTPSILKKRHRGLLSPLSDKRIEKKLDFDMASSLIKDFSCLEVMFDNVETQEAVLPSPSSMGKKNSGTSVEDDKENCGQVVKEEQVLEKNNSAISDDKRSELDTGDSNSQEKSTQSVSDVKSEIKNDVNATAEIVQQPSGVLVKHDRNNLLLHSPDLVGFKSDSDHSLCARAHKSPCSGVKSPYGQEKLRVAVASCVQSFCSSAQGENSDIHAGKDGGFETCGIFGGTPFRRSIESPTTWKSPWLFNTFLSSPKIDTEITIEDFGYFMSPGNRSYDAIEWMKQISPIAREILENETPKASQKNESGNDSDGDHKNNDPCDRPGNHCQLASNAILKVERRILDFSECGTPGKKLPL* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1503 941 Gene3D - 86 137 - -
Lan3g1503 941 Pfam Myb-like DNA-binding domain 89 147 - -
Lan3g1503 941 MobiDBLite consensus disorder prediction 201 248 - -
Lan3g1503 941 SUPERFAMILY Homeodomain-like 83 179 IPR009057 -
Lan3g1503 941 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 80 IPR017930 -
Lan3g1503 941 ProSiteProfiles Myb-like domain profile. 81 132 IPR001005 -
Lan3g1503 941 SUPERFAMILY Homeodomain-like 35 90 IPR009057 -
Lan3g1503 941 MobiDBLite consensus disorder prediction 1 41 - -
Lan3g1503 941 PANTHER TRANSCRIPTION REPRESSOR MYB5 12 202 - -
Lan3g1503 941 PANTHER TRANSCRIPTION REPRESSOR MYB5 334 938 - -
Lan3g1503 941 MobiDBLite consensus disorder prediction 891 906 - -
Lan3g1503 941 CDD SANT 140 180 IPR001005 -
Lan3g1503 941 Gene3D - 33 85 - -
Lan3g1503 941 MobiDBLite consensus disorder prediction 879 909 - -
Lan3g1503 941 MobiDBLite consensus disorder prediction 653 668 - -
Lan3g1503 941 CDD SANT 37 80 IPR001005 -
Lan3g1503 941 MobiDBLite consensus disorder prediction 693 707 - -
Lan3g1503 941 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 187 IPR017930 -
Lan3g1503 941 ProSiteProfiles Myb-like domain profile. 29 80 IPR001005 -
Lan3g1503 941 SMART sant 137 185 IPR001005 -
Lan3g1503 941 SMART sant 85 134 IPR001005 -
Lan3g1503 941 SMART sant 33 82 IPR001005 -
Lan3g1503 941 MobiDBLite consensus disorder prediction 675 692 - -
Lan3g1503 941 CDD SANT 88 132 IPR001005 -
Lan3g1503 941 Gene3D - 139 206 - -
Lan3g1503 941 ProSiteProfiles Myb-like domain profile. 133 183 IPR001005 -
Lan3g1503 941 PANTHER MYB PROTEIN-RELATED 12 202 - -
Lan3g1503 941 PANTHER MYB PROTEIN-RELATED 334 938 - -
Lan3g1503 941 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 136 IPR017930 -
Lan3g1503 941 MobiDBLite consensus disorder prediction 639 707 - -
Lan3g1503 941 Pfam Myb-like DNA-binding domain 34 80 IPR001005 -
Lan3g1503 941 MobiDBLite consensus disorder prediction 201 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1503 Lan-Chr3 26548931 26555869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1503 7 940 MYB Transcription Factor Family AT4G32730 41.567 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan3g1503 Myb_DNA-bind_6 5.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1503 - K09420 gmx:100811335 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1503 3 26548931 26555869 Lan3g1503 3 26548931 26555869 ECH
Lan14g0750 14 14472927 14480371 Lan3g1503 3 26548931 26555869 LSH
Lan10g1003 10 15275554 15283487 Lan3g1503 3 26548931 26555869 PCT
Lan6g1735 6 28591145 28598390 Lan3g1503 3 26548931 26555869 PCT
Lan3g1503 3 26548931 26555869 Lan10g1003 10 15275554 15283487 PCT
Lan3g1503 3 26548931 26555869 Lan6g1735 6 28591145 28598390 PCT