Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1491 ATGGTTTCTTTGGAAACAAAAACAAATCAAATGGAAAGGGAACGAACCCGAAAACGCCCTCGTCTCGCTTGGGATATTGCCCCACCACAACCCTCTCAGTCACAAAGAGATGTGGTGGTGGCTGGTGATGAAGGACTCGAAAAAAGACATGCTTCTCCTCCGAAAAGGAACGATGATCGTGAAGGCCATTATGTTTTTGTTCTCGGTGAAAATATTACTCCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCAAGTTCTGGAATGTTGGGATCGCCAAACCAAAGAGTACGTGGCTGTCAAGGTAATTAGAAGCACACGGAAATACCGGGATGCAGCGATGCTCGAGGTTGATGTACTTCAACAAATAGCGAAGAATGATAGAGGAAACTCACGCTGTGTGCAGATGCGCAACTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGTTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCCGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCACGAACTACATCTAATCCACACTGATTTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCCTAGTTGTAAGAAAAGGGTTTCGTCAGATGAAACACAGTTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTGCTGCATTTGATAATCAGAGTCATAGCTCCATTGTTTCTACAAGACATTACAGAGCCCCTGAGATTATTCTAGGTCTAGGTTGGTCGTACCCATGTGATTTATGGAGTATTGGATGTATCCTCATTGAACTATGTTCGGGTGAAGCGTTGTTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTGTTGGGACCTCTACCAGAGCACATGGCTCGAAGGTCTAGCCGAGGTGCAGAAAAGTACTTCAGGCGTAGTTTTCGACTAAATTGGCCTCAAGGAGCTGTTTCAAGGGAGAGCATTCGCGCAGTGAAGAAGCTCGACCATCTTAAGGACATTATATCGCGACATGTGGATACGTCAAGATCCTCTTTAACTGACTTACTACATGGATTATTGAGGTATGATCCTAGTGAACGTTTAACAGCTCGTGAAGCCCTTGATCATCCCTTCTTTCGGATTCCAGCTTAA 1221 0.4333 MVSLETKTNQMERERTRKRPRLAWDIAPPQPSQSQRDVVVAGDEGLEKRHASPPKRNDDREGHYVFVLGENITPRYKILSKMGEGTFGQVLECWDRQTKEYVAVKVIRSTRKYRDAAMLEVDVLQQIAKNDRGNSRCVQMRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELHLIHTDLKPENILLVSSEYVKLPSCKKRVSSDETQFRCLPKSSAIKLIDFGSAAFDNQSHSSIVSTRHYRAPEIILGLGWSYPCDLWSIGCILIELCSGEALFQTHENLEHLAMMERVLGPLPEHMARRSSRGAEKYFRRSFRLNWPQGAVSRESIRAVKKLDHLKDIISRHVDTSRSSLTDLLHGLLRYDPSERLTAREALDHPFFRIPA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1491 406 SMART serkin_6 76 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1491 406 SUPERFAMILY Protein kinase-like (PK-like) 63 403 IPR011009 -
Lan3g1491 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lan3g1491 406 CDD PKc_CLK 63 402 - -
Lan3g1491 406 MobiDBLite consensus disorder prediction 1 60 - -
Lan3g1491 406 Pfam Protein kinase domain 76 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1491 406 Gene3D Phosphorylase Kinase; domain 1 63 156 - -
Lan3g1491 406 Gene3D Transferase(Phosphotransferase) domain 1 130 402 - -
Lan3g1491 406 MobiDBLite consensus disorder prediction 8 22 - -
Lan3g1491 406 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 49 402 - -
Lan3g1491 406 PANTHER BNAA07G37640D PROTEIN 49 402 - -
Lan3g1491 406 MobiDBLite consensus disorder prediction 41 60 - -
Lan3g1491 406 ProSiteProfiles Protein kinase domain profile. 76 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1491 Lan-Chr3 26411183 26416470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1491 75 403 Core Cell Cycle Gene Families AT3G48750 28.024 4.17e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lan3g1491 Pkinase 1.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1491 K08287 - gmx:100782453 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1491 3 26411183 26416470 Lan3g1491 3 26411183 26416470 ECH