Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1490 ATGAATAAAATATCAGATTCTAACTTTACAAGTAGAGCAATAACTGATATAGATCTCAACAAATGTGAGCCTTGGGAGCTGTCAGGGAAGGCAAAGATGGGAGAAAAAGAATGGTATTTCTTTAGTATGAGAGATCGCAAATACCCCACAGGTGTAAGAACCAATCGAGCAACAAACATTGGATATTGGAAAACAACAGGGAAAGACAAAGAGATCCTTAATAGTGTTACATCTGAATTGATTGGTATGAAGAAGACTCTAGTTTTCTATAAAGGTAGAGCTCCAAGAGGAGAAAAAAGCAATTGGGTTATGCATGAATACCGCAATAACTCAAAATCCAGTTTCAGAAATACCAAGGATGAATGGGTGGTGTGCCGCTTATTCCAGAAAAGTGTTGGTGTGAAAAGGTACCCTAACTCCATTCATGCAAGGGCAGTGAACCCTTATAGCATGGAACTATGTCCCAATACAGTGGCACAACCACTGATTCAGCTAGGAGATCCTGCTACTCATCATTTCCTTTATGGAAGGAACTGCTTGAACAGTGCTGAGTTATCTGAAGTTACTAGGGTTTTAAGAGGGAGTGCATCAACCAGTAGTAATTTCAACCTACCAATGCAATCCCAGTTCAACTACCCAGTAACTGCAGCAGCAGGAGGAGGAGGAGGATTTACCATTTCAGGACTTAATTTGAATCTTGGAGGAGCACCAGCAGCTATGACACAACCTATGTTCCAGCCAATGCAACCACCGCCGCCGCCTCCGGCTCAGACAATGGGTCAAGTAAATGATGTGAGTACTGACATGATGATGGCTGCACCAACTAATTCTCTTGGTGAAGTGAATGTAGGTGGTTATGGTAGTGCAGAAATGAGTAACATAATTAATCAACATGGGAATAGGTTTGTGGGCATGGAACATTGCATGGATCTTGACAACTACTGGCATTCCTACTAA 957 0.418 MNKISDSNFTSRAITDIDLNKCEPWELSGKAKMGEKEWYFFSMRDRKYPTGVRTNRATNIGYWKTTGKDKEILNSVTSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRNNSKSSFRNTKDEWVVCRLFQKSVGVKRYPNSIHARAVNPYSMELCPNTVAQPLIQLGDPATHHFLYGRNCLNSAELSEVTRVLRGSASTSSNFNLPMQSQFNYPVTAAAGGGGGFTISGLNLNLGGAPAAMTQPMFQPMQPPPPPPAQTMGQVNDVSTDMMMAAPTNSLGEVNVGGYGSAEMSNIINQHGNRFVGMEHCMDLDNYWHSY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1490 318 SUPERFAMILY NAC domain 2 130 IPR036093 GO:0003677|GO:0006355
Lan3g1490 318 Gene3D NAC domain 1 133 IPR036093 GO:0003677|GO:0006355
Lan3g1490 318 Pfam No apical meristem (NAM) protein 2 108 IPR003441 GO:0003677|GO:0006355
Lan3g1490 318 ProSiteProfiles NAC domain profile. 1 130 IPR003441 GO:0003677|GO:0006355
Lan3g1490 318 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 315 - -
Lan3g1490 318 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1490 Lan-Chr3 26403987 26406902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1490 1 318 NAC Transcription Factor Family AT2G24430 48.795 1.06e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan3g1490 NAM 3.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1490 - - gmx:100805060 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1490 3 26403987 26406902 Lan3g1490 3 26403987 26406902 ECH
Lan14g0759 14 14524500 14526429 Lan3g1490 3 26403987 26406902 LSH